Transcriptomics

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Environmental pollution assessment using Mus spretus


ABSTRACT: We evaluated the suitability of high-throughput transcriptomics approach to monitor terrestrial ecosystems. Free-living Mus spretus from several polluted sites of Huelva (Andalusia, SW Spain) were compared with mice from Doñana Biological Reserve (“Santa Olalla” lagoon (SOL) used as negative control). As most popular bioindicators, M. spretus is poorly represented in gene databases, therefore limiting the use of genomics in ecotoxicological studies. To solve this problem, we used microarrays produced from mRNAs of M. musculus. Specifically we used the One-Color Gene Expression Platform commercialized by Agilent.

ORGANISM(S): Mus spretus Mus musculus

PROVIDER: GSE33663 | GEO | 2013/12/31

SECONDARY ACCESSION(S): PRJNA148635

REPOSITORIES: GEO

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