Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcriptomic analysis of Alishewanella species utilizing pectin as a sole carbon source

ABSTRACT: Comparative transcriptomic analysis of three Alishewanella species utilizing pectin as a sole carbon source

ORGANISM(S): Alishewanella aestuarii Alishewanella jeotgali Alishewanella agri

PROVIDER: GSE45511 | GEO | 2013/03/29

SECONDARY ACCESSION(S): PRJNA195390

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Transcriptomic analysis of Alishewanella species utilizing pectin as a sole carbon source

Project description:Comparative transcriptomic analysis of three Alishewanella species utilizing pectin as a sole carbon source Gene expression level of three Alishewanella species grown on pectin was investigated and compared with A. jeotgali grown on succinate

2013-03-29 | E-GEOD-45511 | biostudies-arrayexpress

Transcriptomic analysis of Alishewanella species utilizing pectin as a sole carbon source

Project description:Transcriptomic analysis of Alishewanella species utilizing pectin as a sole carbon source

| PRJNA195390 | ENA

Carbon starvation and pectin utilization in Aspergillus nidulans

Project description:We have a cDNA microarray to investigate changes in gene expression following transfer of fungal cultures from growth on glucose to growth on pectin or no carbon source. Our goal was to asses the roles of release from carbon catabolite repression and specific induction on proteins needed for metabolism (or utilization) of a single class of complex polysaccharide. Keywords = Aspergillus Keywords = Pectin Keywords = central metabolism Keywords = pectin Keywords = carbon catabolite repression Keywords = polysaccharide Keywords = exopolygalacturonase Keywords: time-course

2006-01-01 | GSE2417 | GEO

Aspergillus nidulans ∆pkaA strain grown on avicel as sole carbon source

Project description:Transcriptome of A. nidulans ∆pkaA strain when grown on complete media (CM) and transferred to minimal media plus avicel as a sole carbon source for 8 and 24 hours

2015-07-15 | GSE70917 | GEO

Carbon starvation and pectin utilization in Aspergillus nidulans

2010-06-11 | E-GEOD-2417 | biostudies-arrayexpress

mRNA expression data in Δrsf1mutant during growth on, and transition to growth on glycerol as sole carbon source

Project description:Rsf1p is a putative transcription factor required for efficient growth using glycerol as sole carbon source but not for growth on the alternative respiratory carbon source ethanol. We use microarrays to determine the differences in the transcriptional program between the Δrsf1 mutant and the wild type during respiratory growth on glycerol as well as the transition to growth on glycerol as sole carbon source. Keywords: Mutant analysis during timecourse following switching carbon source from dextrose to glycerol

2009-05-29 | GSE10031 | GEO

Aspergillus nidulans strains TNO2a3, ∆snfA and ∆schA grown on avicel as sole carbon source

Project description:Transcriptome of A. nidulans TNO2a3, ∆snfA and ∆schA strains when grown on complete media (CM) and transferred to minimal media plus avicel as a sole carbon source for 8 and 24 hours.

2013-07-16 | GSE47810 | GEO

Aspergillus nidulans strains TNO2a3 and ∆ptpB (AN4896) grown on casaminoacids as sole carbon source transfer to glucose

Project description:Transcriptome of A. nidulans TNO2a3 and ∆ptpB strains when grown on minimal media plus casaminoacids and transferred to minimal media plus glucose as a sole carbon source for 4 hours

2014-10-03 | GSE61980 | GEO

The transcriptome comparison data between Saccharomyces cerevisiae cells in xylose consumption phase after glucose depleted in glucose-xylose co-fermentation and when xylose was the sole carbon source.

Project description:The xylose fermentation rate during xylose consumption phase after glucose depleted in glucose-xylose co-fermentation (defined as GX stage) was much lower than that when xylose was the sole carbon source (defined as X stage). BSGX001 and XH7 are two engineered strains that have the xylose-utilizing capacity. Here,we investigate the transcriptional differences between GX stage and X stage of BSGX001 and XH7, respectively.

2018-04-25 | GSE95076 | GEO

Aspergillus nidulans strains TNO2A3, ∆msbA and ∆MHD grown in complete media (YUU) and on avicel as sole carbon source

Project description:Transcriptome of A. nidulans TNO2A3, ∆msbA and ∆MHD strains when grown on complete media (YUU) and transferred to minimal media plus avicel as a sole carbon source for 24 hours

2015-01-01 | GSE60594 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data