Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bacteroides fragilis oxidative stress

ABSTRACT: The idea was to examine the role of OxyR in control of the oxidative stress response of B. fragilis when exposed to either atmospheric oxygen, 5% oxygen atmosphere, or hydrogen peroxide Keywords: stress response

ORGANISM(S): Bacteroides fragilis Bacteroides fragilis NCTC 9343

PROVIDER: GSE4583 | GEO | 2007/12/30

SECONDARY ACCESSION(S): PRJNA94429

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Role of BmoR in Bacteroides fragilis response to oxidative stress

Project description:Comparison of transcriptional profile of wild-type and bmoR mutant strains of Bacteroides fragilis grown under anaerobic conditions and after exposure to atmospheric oxygen for 1 hour.

2018-02-01 | GSE104575 | GEO

Bacteroides fragilis

Project description:Bacteroides fragilis oxidative stress

| PRJNA94429 | ENA

Identification of the Bacteroides fragilis EcfO regulon 1

Project description:Genome expression study of Bacteroides fragilis ATCC25285 strain containing the EcfO gene constitutively expressed from plasmid pFD340

2013-01-01 | GSE35536 | GEO

Expression analysis of Bacteroides fragilis NCTC 9343 delta-gmd-fcl delta-fkp and B. fragilis NCTC 9343 delta-lfg

Project description:Investigation of whole genome gene expression level changes in a Bacteroides fragilis NCTC 9343 delta-gmd-fcl delta-fkp mutant strain and a Bacteroides fragilis NCTC 9343 delta-lfg mutant strain, each as compared to the wild-type strain. The mutations engineered into these strains interfere with B. fragilis protein glycosylation.

2010-08-06 | GSE12440 | GEO

The bacteroides fragilis(BF) in colorectal carcinogenesis

Project description:To elucidate whether Enterotoxigenic Bacteroides fragilis (ETBF) plays a role in colorectal cancer tumorigenesis, a RNA-seq analysis was performed to compare the gene expression profiles of ETBF treated DLD-1 colorectal cancer cell lines.

2020-04-13 | GSE130152 | GEO

Expression analysis of Bacteroides fragilis NCTC 9343 delta-ungD1 delta-ungD2

Project description:Investigation of whole genome gene expression level changes in a Bacteroides fragilis NCTC 9343 delta-ungD1 delta-ungD2 double mutant compared to the wild-type strain. Keywords: expression analysis A six chip study using total RNA recovered from three separate wild-type cultures of Bacteroides fragilis NCTC 9343 and three separate cultures of a double mutant strain, Bacteroides fragilis NCTC 9343 delta-ungD1 delta-ungD2, in which ungD1 (BF1706) and ungD2 (BF2848) are deleted. Each chip measures the expression level of 4,302 genes from Bacteroides fragilis NCTC 9343 and the associated plasmid pBF9343 with fourteen 24-mer probe pairs (PM/MM) per gene, with three-fold technical redundancy.

2010-04-15 | E-GEOD-7450 | biostudies-arrayexpress

Identification of the Bacteroides fragilis EcfO regulon 2

Project description:Genome expression study of Bacteroides fragilis strain 638R comparing a EcfO null mutant with an empty vector to a anti-EcfO null mutant containing the EcfO gene on a plasmid under the control of an IPTG inducible promoter.

2013-01-01 | GSE35537 | GEO

Identification of the Bacteroides fragilis EcfO regulon 3

Project description:Genome expression study of Bacteroides fragilis strain 638R comparing a EcfO/anti-EcfO null mutant with an empty vector to a EcfO/anti-EcfO null mutant containing the EcfO gene on a plasmid under the control of a maltose inducible promoter.

2013-01-01 | GSE35538 | GEO

Identification of the Bacteroides fragilis EcfO regulon 1

Project description:Genome expression study of Bacteroides fragilis ATCC25285 strain containing the EcfO gene constitutively expressed from plasmid pFD340 Two chip study with 5 technical replicates on each chip comparing the EcfO overexpressing strain to an empty vector control in the wild type strain.

2013-01-01 | E-GEOD-35536 | biostudies-arrayexpress

Bacteroides fragilis 638R

Project description:Role of the Bacteroides fragilis EcfO regulon during oxidative stress.

| PRJNA170529 | ENA