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Expression data from LoVo and GP5d CRC cell lines

ABSTRACT: TF binding clusters in promoter correlate well with gene expression. We used ChIP-seq to map binding sites of the majority of highly expressed TFs in the cell. The size of clusters of TFs in the promoters of genes were found to correlate well with gene expression.

ORGANISM(S): Homo sapiens

PROVIDER: GSE48448 | GEO | 2013/08/16

SECONDARY ACCESSION(S): PRJNA210195

REPOSITORIES: GEO

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Expression data from LoVo and GP5d CRC cell lines

Project description:TF binding clusters in promoter correlate well with gene expression. We used ChIP-seq to map binding sites of the majority of highly expressed TFs in the cell. The size of clusters of TFs in the promoters of genes were found to correlate well with gene expression. CRC cell lines were grown on plastic This submission reprsents transcriptome component of study.

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