Transcriptomics

Dataset Information

0

Transcriptome comparison of wild type Azoarcus sp. strain BH72 grown under nitrogen fixation (experiment) with cells grown with combined nitrogen (ammonia) as nitrogen source


ABSTRACT: Model endophyte Azoarcus sp. BH72 is known to contribute fixed nitrogen to its host Kallar grass by nitrogen fixation and also expresses nitrogenase genes endophytically in rice seedlings in gnotobiotic culture. Availability of fixed nitrogen is one of the important signals regulating the transcription of nitrogenase genes and hence nitrogen fixing activity. Therefore, we analysed global transcription in response to differences in the nitrogen source. Transcription profiles of cells grown microaerobically (0.6% oxygen) on minimal medium with nitrogen (N2-fixing) versus ammonium (combined nitrogen) were compared using a genome-wide microarray approach and differences in the gene expression profile were monitored.

ORGANISM(S): Azoarcus sp. Azoarcus olearius

PROVIDER: GSE49394 | GEO | 2013/08/01

SECONDARY ACCESSION(S): PRJNA213876

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2013-08-15 | GSE49912 | GEO
2013-08-01 | E-GEOD-49394 | biostudies-arrayexpress
2013-08-15 | E-GEOD-49912 | biostudies-arrayexpress
2014-09-13 | GSE61387 | GEO
2011-12-01 | GSE25939 | GEO
2011-12-01 | E-GEOD-25939 | biostudies-arrayexpress
2014-09-13 | E-GEOD-61387 | biostudies-arrayexpress
2021-09-06 | GSE176473 | GEO
2019-09-01 | GSE136707 | GEO
2012-11-30 | GSE35187 | GEO