Transcriptomics

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Transcript profiling in stem base of crown root less 1 mutant after ectopic expression induction by dexamethasome of CRL1


ABSTRACT: Lateral Organ Boundary Domain (LBD) transcription factors are specific of plants and are involved in the control of development. One LBD clade is related to the control of root development (Coudert et al., 2013, Mol. Biol. Evol. 30, 569-572). Belonging to this clade, CROWN ROOT LESS 1 controls the initiation of crown roots in rice (Inukai Plant Cell, 17, 1387-1396, Liu et al., 2005, Plant J., 43, 47-56). The aim of this study was to identify the genes that are regulated by CRL1. Transcriptome analysis in crl1 mutant plants where the CRL1 gene expression was ectopically induced revealed a set of 277 up regulated genes including a large part of genes encoding transcription factors and genes encoding proteins associated to hormone homeostasis, to cell division, expansion and differentiation.

ORGANISM(S): Oryza sativa

PROVIDER: GSE53272 | GEO | 2015/01/01

SECONDARY ACCESSION(S): PRJNA231520

REPOSITORIES: GEO

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