Transcriptomics

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Hit-and-run transcriptional control by bZIP1 mediates rapid nutrient signaling in Arabidopsis


ABSTRACT: To identify potential transient interactions between a TF and its targets, we developed an approach that can identify primary targets based either on TF-induced regulation or TF-binding, assayed in the same samples. Our studies focused on the TF bZIP1 (BASIC LEUCINE ZIPPER 1), a central integrator of cellular and metabolic signaling. To discern the mechanisms by which bZIP1 regulates a gene netowork in response to a nitrogen (N)-signal perceived in vivo, we perturbed both bZIP1 and the N-signal that it transduces in a cell-based transient expression system called TARGET (Transient Assay Reporting Genome-wide Effects of Transcription factors).

ORGANISM(S): Arabidopsis thaliana

PROVIDER: GSE54049 | GEO | 2014/06/23

SECONDARY ACCESSION(S): PRJNA234482

REPOSITORIES: GEO

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