Transcriptomics

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Transcriptome analyses of the Laccaria bicolor-Populus trichocarpa mycorrhiza development


ABSTRACT: Illumina GAIIx technology was used to generate mRNA profiles from the ectomycorrhizal fungi Laccaria bicolor colonizing roots of Populus trichocarpa. Samples were taken after two, four and 12 weeks of contact in order to identify mycorrhiza-regulated transcripts. 37bp reads were generated and aligned to the Populus trichocarpa (http://www.phytozome.net/poplar.php) and the Laccaria bicolor (http://genome.jgi-psf.org/Lacbi2/Lacbi2.home.html) reference genomes using CLC Genomics Workbench 6.

ORGANISM(S): Laccaria bicolor Populus trichocarpa

PROVIDER: GSE54789 | GEO | 2014/02/08

SECONDARY ACCESSION(S): PRJNA237653

REPOSITORIES: GEO

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