Genomics

Dataset Information

0

ChIP-seq of E4F1 in primary mouse embryonic fibroblasts (MEFs) and in p53-/-, Ha-RasV12-transformed MEFs


ABSTRACT: E4F1 is a ubiquitously expressed zinc-finger protein of the Gli-Kruppel family that was first identified, more than 30 years ago, as a cellular target of the adenoviral oncoprotein E1A13S (Ad type V), required for transcriptional regulation of adenoviral genes. In order to decipher E4F1 cellular target genes, we performed chromatin immunoprecipitation of endogenous E4F1 in primary and in p53KO, Ha-RasV12-transformed MEFs. Both input and immunoprecipitated DNA were exhaustively sequenced and mapped on the mouse genome (mm9). Peak detection has been achieved by combining two peak calling algorithms. Intersection of the two E4F1 peak lists on each cell line were considered as E4F1 chromatin bound regions.

ORGANISM(S): Mus musculus

PROVIDER: GSE57228 | GEO | 2015/04/01

SECONDARY ACCESSION(S): PRJNA246035

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2015-04-01 | E-GEOD-57228 | biostudies-arrayexpress
2015-04-01 | GSE57240 | GEO
2015-04-01 | E-GEOD-57240 | biostudies-arrayexpress
2016-09-12 | GSE57221 | GEO
2022-03-01 | GSE128104 | GEO
2022-03-01 | GSE128099 | GEO
2011-04-02 | GSE28228 | GEO
2011-04-02 | E-GEOD-28228 | biostudies-arrayexpress
2019-07-02 | GSE127228 | GEO
2021-03-31 | GSE128012 | GEO