Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Mutant array

ABSTRACT: This data was annotated by TAIR (http://arabidopsis.org). Two week-old Arabidopsis aerial tissues from Columbia-0 and cpr5, cpr5npr1, cpr5scv1, cpr5npr1svi1, and npr1 lines were collected for analysis. Experimenter name = Jinyoung Yang Experimenter phone = 919-613-8176, 919-61 Experimenter fax = 919-613-8177 Experimenter department = DCMB GROUP Experimenter institute = Duke University Experimenter address = B361 LSRC Bldg. Experimenter address = Research Dr. Experimenter address = Durham Experimenter zip/postal_code = NC 27708 Experimenter country = USA Keywords: genetic_modification_design

ORGANISM(S): Arabidopsis thaliana

PROVIDER: GSE5745 | GEO | 2007/01/08

SECONDARY ACCESSION(S): PRJNA97063

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Transcription profiling of Arabidopsis aerial tissues from Columbia-0 and cpr5, cpr5npr1, cpr5scv1, cpr5npr1svi1, and npr1Mutant array

Project description:This data was annotated by TAIR (http://arabidopsis.org). Two week-old Arabidopsis aerial tissues from Columbia-0 and cpr5, cpr5npr1, cpr5scv1, cpr5npr1svi1, and npr1 lines were collected for analysis. Experimenter name = Jinyoung Yang; Experimenter phone = 919-613-8176, 919-61; Experimenter fax = 919-613-8177; Experimenter department = DCMB GROUP; Experimenter institute = Duke University; Experimenter address = B361 LSRC Bldg. Experimenter address = Research Dr. Experimenter address = Durham; Experimenter zip/postal_code = NC 27708; Experimenter country = USA Experiment Overall Design: 12 samples were used in this experiment

2008-06-14 | E-GEOD-5745 | biostudies-arrayexpress

Comparison of transcriptional profiles between sni1 and wild type

Project description:Microarray experiment was performed using 4-week old plants to compare transcriptional profiles between sni1 (suppressor of npr1) and wild type (Col-0). Three biological replicates were included. Experimenter name: Wendy Durrant Experimenter phone: 1(919)613-8175 Experimenter fax: 1(919)613-8177 Experimenter department: Durrant Lab Experimenter institute: Duke University Experimenter address: Rm. B354, LSRC Bldg. Experimenter address: Research Dr. Experimenter address: Duke University Experimenter address: Durham, NC Experimenter zip/postal_code: 27708 Experimenter country: USA Keywords: genetic_modification_design;

2007-01-22 | GSE6827 | GEO

Transcription profiling of Arabidopsis sni1 and wild type

Project description:Microarray experiment was performed using 4-week old plants to compare transcriptional profiles between sni1 (suppressor of npr1) and wild type (Col-0). Three biological replicates were included. Experimenter name: Wendy Durrant; Experimenter phone: 1(919)613-8175; Experimenter fax: 1(919)613-8177; Experimenter department: Durrant Lab; Experimenter institute: Duke University; Experimenter address: Rm. B354, LSRC Bldg. Experimenter address: Research Dr. Experimenter address: Duke University; Experimenter address: Durham, NC; Experimenter zip/postal_code: 27708; Experimenter country: USA Experiment Overall Design: 6 samples were used in this experiment

2008-06-15 | E-GEOD-6827 | biostudies-arrayexpress

FRI FLC combos

Project description:This experiment was annotated by TAIR (http://arabidopsis.org).FRI FLC time series Experimenter name = Markus Schmid Experimenter phone = ++49-7071-601-1413 Experimenter fax = ++49-7071-601-1412 Experimenter department = Detlef Weigel Laboratory Germany Experimenter institute = Max-Planck-Institute for Developmental Biology Experimenter address = Dept. of Molecular Biology Experimenter address = Spemannstr. 37-39 Experimenter address = Tübingen Experimenter zip/postal_code = 72076 Experimenter country = Germnay Keywords: time_series_design; strain_or_line_design; innate_behavior_design

2007-01-08 | GSE5746 | GEO

Tissue Type Arrays of Columbia-0

Project description:This experiment has been annotated by TAIR (http://arabidopsis.org). In this experiment, different tissue preparations of wild type Columbia-0 Arabidopsis thaliana plants were hybridized and run on the ATH1 Affymetrix platform. Experimenter name = Chris Somerville Experimenter phone = 650-325-1521 ext203 Experimenter fax = 650-325-6857 Experimenter address = Plant Biology Experimenter address = Carnegie Institution Experimenter address = 260 Panama Street Experimenter address = Stanford Experimenter zip/postal_code = CA 94305-1297 Experimenter country = USA Keywords: organism_part_comparison_design;

2006-08-15 | GSE5533 | GEO

Responses to overexpression of wild type and constitutively active Arabidopsis MAP Kinase Kinase 2

Project description:This experiment has been annotated by TAIR (http://arabidopsis.org). We examined transcript profiles triggered by three different arabidopsis R genes that recognize distinct Peronospora parasitica isolates. Experimenter name = Thomas Eulgem Experimenter phone = 43 1 4277 54622 Experimenter fax = 43 1 4277 9546 Experimenter department = Institute of Microbiology and Genetics Experimenter address = Institute of Microbiology and Genetics Experimenter address = Dr. Bohrgasse 9 Experimenter address = Vienna Experimenter zip/postal_code = A-1030 Experimenter country = Austria Keywords: strain_or_line_design

2006-08-15 | GSE5532 | GEO

Response to CBF2 expression

Project description:This experiment was annotated by TAIR (http://arabidopsis.org). This experiment looks at changes in gene expression in response to constitutive expression of the transcription factor CBF2. Experimenter name = Jonathan Vogel Experimenter phone = 517-355-2299 Experimenter fax = 517-353-5174 Experimenter department = MSU-DOE Plant Research Lab Experimenter institute = Michigan State University Experimenter address = East Lansing Experimenter zip/postal_code = MI 48824 Experimenter country = USA Keywords: genetic_modification_design

2006-08-15 | GSE5536 | GEO

Response to ZAT12 expression

Project description:This experiment was annotated by TAIR (http://arabidopsis.org). This experiment looks at changes in gene expression in response to constitutive expression of the transcription factor ZAT12. Experimenter name = Jonathan Vogel Experimenter phone = 517-355-2299 Experimenter fax = 517-353-5174 Experimenter department = MSU-DOE Plant Research Lab Experimenter institute = Michigan State University Experimenter address = East Lansing Experimenter zip/postal_code = MI 48824 Experimenter country = USA Keywords: genetic_modification_design

2007-01-08 | GSE5742 | GEO

Response to cold, plate grown plants

Project description:This experiment was annotated by TAIR (http://arabidopsis.org). This experiment looks at changes in gene expression in Col-0 plants grown in plates in response to low temperature over time. Experimenter name = Jonathan Vogel Experimenter phone = 517-355-2299 Experimenter fax = 517-353-5174 Experimenter department = MSU-DOE Plant Research Lab Experimenter institute = Michigan State University Experimenter address = East Lansing Experimenter zip/postal_code = MI 48824 Experimenter country = USA Keywords: time_series_design

2006-08-15 | GSE5534 | GEO

Response to cold, soil grown plants

Project description:This experiment was annotated by TAIR (http://arabidopsis.org). This experiment looks at changes in gene expression in Col-0 plants grown in soil in response to low temperature over time. Experimenter name = Jonathan Vogel Experimenter phone = 517-355-2299 Experimenter fax = 517-353-5174 Experimenter department = MSU-DOE Plant Research Lab Experimenter institute = Michigan State University Experimenter address = East Lansing Experimenter zip/postal_code = MI 48824 Experimenter country = USA Keywords: time_series_design

2006-08-15 | GSE5535 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data