Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcriptional Profiling of Apple (Malus x domestica Borkh) Floral Induction in Shoot Apical Meristems

ABSTRACT: Effect of the presence of fruits on the expression of genes possibly involved in floral induction in the terminal meristem of spur bourse shoot. Investigation on mecanisms involved in Biennial Bearing in mature apple trees cultivar Royal Gala.

ORGANISM(S): Malus domestica

PROVIDER: GSE64646 | GEO | 2016/03/02

SECONDARY ACCESSION(S): PRJNA271559

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Transcriptional Profiling of Apple (Malus x domestica Borkh) Floral Induction in Shoot Apical Meristems

Project description:Effect of the presence of fruits on the expression of genes possibly involved in floral induction in the terminal meristem of spur bourse shoot. Investigation on mecanisms involved in Biennial Bearing in mature apple trees cultivar Royal Gala. Two-condition experimentÂ : 'ON' trees (unthinned control) & 'OFF' trees (deflowered) for comparison. Three comparisons at sampling datesÂ : 28, 48 and 119 days after full bloom (DAFB). Two dye switch biological replicates for each treatment and sampling date.

2016-03-02 | E-GEOD-64646 | biostudies-arrayexpress

Microarray analysis of apple buds during dormancy

2015-04-06 | GSE64717 | GEO

Transcriptional profiling of apple (Malus x domestica Borkh) pedicels abscission zone development

Project description:Apple pedicel vascular development array

2014-05-20 | GSE51727 | GEO

Transcriptional profiling of apple (Malus x domestica Borkh) pedicels abscission zone development

Project description:Apple pedicel vascular development array Twelvet apple samples. Biological replicates: 2 for each sample, independently grown and harvested.

2014-05-20 | E-GEOD-51727 | biostudies-arrayexpress

1-MCP effect on the transcriptional profiling of apple flesh (Malus x domestica Borkh, Gala variety) maintained in cold storage

Project description:Apples (Malus x domestica Borkh, Gala variety) grown in commercial orchards were harvested at maturity and maintained 2 months in cold storage with or without 1-MCP treatment.

2017-08-28 | GSE59728 | GEO

Transcriptional profiling of apple (Malus x domestica Borkh) pedicels displaying abnormal additional amphivasal vascular bundles in the pith

Project description:Apple pedicel vascular development array

2014-05-20 | GSE51728 | GEO

Transcriptional profiling of apple (Malus x domestica Borkh) pedicels displaying abnormal additional amphivasal vascular bundles in the pith

Project description:Apple pedicel vascular development array Eight apple samples. Biological replicates: 2 for each sample, independently grown and harvested.

2014-05-20 | E-GEOD-51728 | biostudies-arrayexpress

Malus domestica

Project description:Malus domestica Royal Gala: wild vs transformed

| PRJNA824079 | ENA

Microarray analysis of apple buds during dormancy

Project description:Closed terminal buds of apple trees (Malus x domestica Borkh, Royal Gala and Castel Gala varieties) grown in commercial orchards were harvested during autumn and winter and exposed to cold treatments 18 biological samples, consisting of 9 pairs of replicates, were analysed in dye-swap. Samples are whole closed terminal buds. Biological replicates are buds from 2 different harvest year subjected to similar cold treatments. Samples with contrasting dormancy status in the same harvest year were compared in 8 dye-swap. Most samples were hybridized more than once in different combinations

2015-04-06 | E-GEOD-64717 | biostudies-arrayexpress

RNA sequencing of Malus x domestica Borkh. with Botrytis cinerea

Project description:Apple is typically stored under low temperature and controlled atmospheric conditions to ensure a year round supply of high quality fruit for the consumer. During storage, losses in quality and quantity occur due to spoilage by postharvest pathogens. One important postharvest pathogen of apple is Botrytis cinerea. The fungus is a broad host necrotroph with a large arsenal of infection strategies able to infect over 1,400 different plant species. We studied the apple-B. cinerea interaction to get a better understanding of the defense response in apple. We conducted an RNAseq experiment in which the transcriptome of inoculated and non-inoculated (control and mock) apples was analyzed at 0, 1, 12 and 28 h post inoculation. Our results show extensive reprogramming of the apple's transcriptome with about 28.9 % of expressed genes exhibiting significant differential regulation in the inoculated samples. We demonstrate the transcriptional activation of pathogen-triggered immunity and a reprogramming of the fruit’s metabolism. We demonstrate a clear transcriptional activation of secondary metabolism and a correlation between the early transcriptional activation of the mevalonate pathway and reduced susceptibility, expressed as a reduction in resulting lesion diameters. This pathway produces the building blocks for terpenoids, a large class of compounds with diverging functions including defense. 1-MCP and hot water dip treatment are used to further evidence the key role of terpenoids in the defense and demonstrate that ethylene modulates this response.

2022-03-01 | GSE195841 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data