Transcriptome and translatome landscape of Streptomyces coelicolor M145
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ABSTRACT: We have integrated nucleotide resolution genome-scale measurements of the transcriptome and translatome of the Streptomyces coelicolor A3(2), the model antibiotic-producing actinomycete. Our systematic study determined 3,473 transcription start sites, leading to discovery of a high proportion (~21%) of leaderless mRNAs and 230 non-coding RNAs; this enabled deduction of promoter architecture on a genome-scale. Ribosome profiling analysis revealed that the translation efficiency was negatively correlated for secondary metabolic genes. These results provide novel fundamental insights into translational regulation of secondary metabolism that enables rational synthetic biology approaches to awaken such ‘silent’ secondary metabolic pathways.
ORGANISM(S): Streptomyces coelicolor
PROVIDER: GSE69350 | GEO | 2016/05/28
SECONDARY ACCESSION(S): PRJNA285265
REPOSITORIES: GEO
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