Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

CVB3-infected HeLa cells (multiple time points and triplicate sample per time point)

ABSTRACT: HeLa cells were serum starved and either preincubated with DMSO (vehicle), preincubated with U0126 (10µM in DMSO) and infected with CVB3 (MOI 10), or preincubated with DMSO (vehicle) and infected with CVB3. Following infection, virus was removed and fresh media containing 10% fetal bovine serum was added for the remainder of the infectious process. At 0, 30 minutes, 3 and 9 hours following CVB3 infection (N=3 plates per time point), RNA was isolated, processed and hybridized to GeneChip®s (N=3 per sample) Keywords: time-course

ORGANISM(S): Homo sapiens

PROVIDER: GSE697 | GEO | 2003/10/07

SECONDARY ACCESSION(S): PRJNA87657

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Transcription profiling of human coxsackievirus B3 (CVB3) infected HeLa cells (multiple time points and triplicate sample per time point)

Project description:HeLa cells were serum starved and either preincubated with DMSO (vehicle), preincubated with U0126 (10ÂµM in DMSO) and infected with CVB3 (MOI 10), or preincubated with DMSO (vehicle) and infected with CVB3. Following infection, virus was removed and fresh media containing 10% fetal bovine serum was added for the remainder of the infectious process. At 0, 30 minutes, 3 and 9 hours following CVB3 infection (N=3 plates per time point), RNA was isolated, processed and hybridized to GeneChipÂ®s (N=3 per sample)

2007-09-28 | E-GEOD-697 | biostudies-arrayexpress

CVB3-infected HeLa cells (multiple time points)

Project description:HeLa cells were serum starved and preincubated with DMSO (vehicle) and infected with CVB3. Following infection, virus was removed and fresh media containing 10% fetal bovine serum was added for the remainder of the infectious process. At 0, 30 minutes, 1, 3, 5, 7 and 9 hours following CVB3 infection, RNA was isolated, processed and hybridized to GeneChip®s. Keywords: time-course

2003-10-09 | GSE712 | GEO

Transcription profiling of human CVB3-infected HeLa cells (multiple time points)

2007-09-25 | E-GEOD-712 | biostudies-arrayexpress

CVB3 infected fetal mice

Project description:Difference in RNA sequencing in CVB3 infected and control mice fetuses

2020-09-05 | GSE157522 | GEO

CVB3 infected fetal mice

Project description:CVB3 infected fetal mice

| PRJNA661563 | ENA

RNA sequencing of chronic and acute coxsackievirus B3 (CVB3) infection

Project description:The goal of this study was to examine gene expression changes associated with CVB3 infection in cell culture. Induced pluripotent stem cell (iPSC)-derived cardiomyocytes and AC16 cells were used to study acute infection. AC16 cells expressing low levels of CVB3 RNA were used to study chronic infection.

2024-03-28 | GSE262649 | GEO

RNA-Sequencing data of coxsackievirus type B3(CVB3) infected human neural progenitor stem cell(hNPC)

Project description:RNA profiles of hNPC infected with CVB3 were generated by Quant-Seq

2019-09-03 | GSE136734 | GEO

Coxsackievirus B3 (CVB3) infection of 129S1 and 129X1 (heart tissue day 6)

Project description:We infected two strains of mice, 129S1/SvImJ and 129X1/SvJ, with coxsackievirus type b3 (CVB3) at a dose of 500 pfu/g. 129S1 mice developed increased cardiopathology despite equal viral replication. We hypothesized that the increased cardiopathology might result from an ongoing pathologic host response that we could characterize by global expression profiling. Gene expression was assessed in hearts from 129S1 and 129X1 mice that were uninfected or infected for 6 days. Total RNA obtained from hearts of 3 129S1 and 3 129X1 that were infected or uninfected with CVB3(H3) at 500pfu/g and collected at day 6 post infection

2013-04-01 | E-GEOD-44706 | biostudies-arrayexpress

Gallus gallus Control Versus SU5402, LY294002 or U0126 Treated Preingression Epiblast from Gastrula Stage Embryos

Project description:Transcriptional profiling of the preingression epiblast versus lateral epiblast, of preingression epiblast from control embryos treated with the DMSO carrier vehicle (0.5%) versus embryos treated with SU5402, U0126 or LY294002. Embryos were stages 5-6 at time of tissue isolation. The preingression epiblast (E2 region) is the region of epiblast just lateral to the primitive streak. Lateral epiblast is the E3 region. Two condition experiment. Samples for each condition isolated from at least 30 embryos.

2011-02-20 | GSE27403 | GEO

Proteome and phosphoproteome dynamics of CVB3 infected cells

Project description:Viruses are obligate intracellular parasites that reshape the ultrastructure, composition and metabolism of host cells to suit their specific needs, although disparate viruses may modify their host in different ways. Such changes may be specifically induced by the virus to support the infection or be part of cellular antiviral responses or stress responses. Here, using state-of-the-art quantitative (phospho)proteomics, we reveal the unique proteome and phosphoproteome dynamics that occur in the host cells infected with the enterovirus coxsackievirus B3 (CVB3).

2020-07-23 | PXD011163 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data