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Transcriptome Profiling of Two Separatively Reproduced Arabidopsis Lines

ABSTRACT: We profiled transcriptome of seedling samples derived from SALK Col-0 plants and a Col-0 plants reproduced in our lab for at least 10 generations. Using strand-specific RNA-seq analysis, we identified 32 genes were differentially expressed genes (fold-change > 2, DESeq2 P-value < 0.01), including 28 ones (88%) were up-regulated in the Col-0 plants reproduced in our lab. Of them, QUA-QUINE STARCH (QQS) ranked top 2 differentially expressed gene.

ORGANISM(S): Arabidopsis thaliana

PROVIDER: GSE71085 | GEO | 2017/06/01

SECONDARY ACCESSION(S): PRJNA290325

REPOSITORIES: GEO

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