Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ENCODE Transcript Mapping for Human HeLa Total RNA

ABSTRACT: Transcript Mapping on Affymetrix ENCODE arrays for 3 different biological replicates of HeLa Total RNA Keywords: other

ORGANISM(S): Homo sapiens

PROVIDER: GSE7467 | GEO | 2007/04/06

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

ENCODE Transcript Mapping for Human HeLa Poly(A)+ RNA

Project description:Transcript Mapping on Affymetrix ENCODE arrays for 3 different biological replicates of HeLa Poly(A)+ RNA Keywords: other

2007-04-06 | GSE7437 | GEO

ENCODE Transcript Mapping for Human Neutrophil (PMN) Total RNA

Project description:Transcript Mapping on Affymetrix ENCODE arrays for 10 different biological replicates of Neutrophil (PMN) Total RNA (each with 2 technical replicates). Each biological sample is from a different individual. Keywords = Transcript Mapping, Human, Affymetrix, Genome Tiling Arrays Keywords: other

2005-05-19 | GSE2678 | GEO

ENCODE Transcript Mapping for Human Placental Poly(A)+ RNA

Project description:Transcript Mapping on Affymetrix ENCODE arrays for 3 different biological replicates of Placental Poly(A)+ RNA (each with either 2 or 3 technical replicates) Keywords = Transcript Mapping, Human, Affymetrix, Genome Tiling Arrays Keywords: other

2005-05-18 | GSE2671 | GEO

ENCODE Transcript Mapping for Total RNA from Human NB4 Cells untreated, treated with RA, and treated with TPA

Project description:Transcript Mapping on Affymetrix ENCODE arrays for Total RNA from 4 different samples (2 or 3 technical replicates of each). All of the four same NB4 samples have also been treated with Retanoic Acid (RA) (2 or 3 technical replicates of each). Three of the four same NB4 samples have also been treated with TPA (2 or 3 technical replicates of each). RA treated NB4 cells can be partially differentiated to Neutrophils and TPA treated NB4 cells can be differentiated to Monocytes. Keywords = Transcript Mapping, Human, Affymetrix, Genome Tiling Arrays Keywords: parallel sample

2005-05-19 | GSE2679 | GEO

ENCODE Transcript Mapping for Human Placental Poly(A)+ RNA

2010-06-10 | E-GEOD-2671 | biostudies-arrayexpress

ENCODE Transcript Mapping for Total RNA from Human NB4 Cells untreated, treated with RA, and treated with TPA

2010-06-10 | E-GEOD-2679 | biostudies-arrayexpress

ENCODE ChIP-chip for STAT1 on Human Hela S3 Cells

Project description:STAT1 ChIP-chip performed on Human Hela S3 Cells for three different platforms. Nimblegen ENCODE arrays which comprise 50mer oligonucleotides spaces every 38bps (overlapping by 12nts) (5 biological replicates), custom maskless array tiling most of ENCODE with 50mer oligonucleotides end-to-end (3 biological replicates) and custom maskless array tiling most of ENCODE with 36mer oligonucleotides end-to-end (2 biological replicates). The chromatin-immunoprecipitation protocol is the same for all samples, however the labelling and hybridization protocols differ between Nimblegen and custom maskless arrays. Keywords = Transcription Factor Binding, STAT1, ChIP-chip, Human, Genome Tiling Arrays Keywords: other

2005-05-27 | GSE2714 | GEO

ENCODE ChIP-chip for JUN on Human Hela S3 Cells

Project description:JUN ChIP-chip performed on Human Hela S3 Cells for Nimblegen ENCODE arrays which comprise 50mer oligonucleotides spaced every 38bps (overlapping by 12nts). Goal is to identify binding sites for JUN. Keywords = Transcription Factor Binding, JUN, ChIP-chip, Human, Genome Tiling Arrays Keywords: ChIP-chip

2005-10-19 | GSE3448 | GEO

ENCODE ChIP-chip for FOS on Human Hela S3 Cells

Project description:FOS ChIP-chip performed on Human Hela S3 Cells for Nimblegen ENCODE arrays which comprise 50mer oligonucleotides spaces every 38bps (overlapping by 12nts). Goal was to identify FOS-binding sites. Keywords = Transcription Factor Binding, FOS, ChIP-chip, Human, Genome Tiling Arrays Keywords: ChIP-chip

2005-10-19 | GSE3449 | GEO

ENCODE ChIP-chip for BAF170 on Human Hela S3 Cells

Project description:BAF170 ChIP-chip performed on Human Hela S3 Cells for Nimblegen ENCODE arrays which comprise 50mer oligonucleotides spaced every 38bps (overlapping by 12nts). Goal is to identify binding sites for BAF170. Keywords = Transcription Factor Binding, BAF170, ChIP-chip, Human, Genome Tiling Arrays Keywords: ChIP-chip

2005-11-04 | GSE3550 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data