Transcriptomics

Dataset Information

0

Effects of TLR4 ligands on inflammatory and lymphatic endothelial specific-cell gene expression in CD14+ PBMC


ABSTRACT: Blood was donated by a healthy volunteer with no known illness or malignancies. Mononuclear cells were separated from the blood by density gradient and CD14+ cells were isolated using anti-CD14 IgG-conjugated magnetic beads and magnetic separation (Miltenyi Biotec). Cells were cultured for 7 days prior to treatment for 96 hours with one of three TLR4 ligands: LPS, HMGB1 or Nab-Paclitaxel. Total RNA was extracted and was analyzed via SYBR Green RT-qPCR. We used an in-house array to analyze the gene expression of a total of 150 targets including 33 cytokines, 34 cytokine receptors, 11 known TLR targets, 64 other inflammation-related proteins, 31 endothelial related transcription factors, 12 myeloid associated genes, 12 genes expressed primarily in lymphatic endothelial cells, and 23 endothelial cell associated proteins. The results show a LPS, HMGB1 and Nab-Paclitaxel upregulated expression of lymphatic specific markers to varying degrees. LPS had the strongest induction of gene expression followed by HMGB1 and Nab-Paclitaxel, in general.

ORGANISM(S): Homo sapiens

PROVIDER: GSE78162 | GEO | 2016/04/22

SECONDARY ACCESSION(S): PRJNA312798

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2016-04-22 | GSE75518 | GEO
2019-05-31 | GSE131762 | GEO
2009-11-27 | E-MEXP-2465 | biostudies-arrayexpress
2020-02-12 | E-MTAB-8784 | biostudies-arrayexpress
2013-11-11 | GSE51716 | GEO
2024-03-21 | GSE262149 | GEO
2022-03-24 | GSE193336 | GEO
2007-10-02 | E-GEOD-3037 | biostudies-arrayexpress
2015-11-30 | GSE63519 | GEO
2024-06-01 | GSE262746 | GEO