Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-seq analyses of JMJD3c-MYOD1-induced myogenic cells and human skeletal myotubes

ABSTRACT: We generated the human ES lines, in which the genome-wide reduction of H3K27me3 can be induced by the ectopic expression of catalytic domain of histone demethylase JMJD3 with doxycycline treatment (JMJD3c-hESCs). The overexpression of JMJD3c enhances MYOD1-mediated myogenic differentiation of hESCs. We compared the gene expression patterns of the generated myogenic cells with those of human skeletal myotubes.

ORGANISM(S): Homo sapiens

PROVIDER: GSE80106 | GEO | 2016/10/18

SECONDARY ACCESSION(S): PRJNA317930

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

myod1

Project description:Danio rerio myod1, myogenic differentiation 1 [Source:NCBI gene;Acc:30513], is differentially expressed in 1 experiment(s);

| ENSDARG00000030110 | ExpressionAtlas

Myod1

Project description:Rattus norvegicus Myod1, myogenic differentiation 1 [Source:RGD Symbol;Acc:631429], is expressed in 6 baseline experiment(s);

| ENSRNOG00000011306 | ExpressionAtlas

MYOD1

Project description:Monodelphis domestica MYOD1, myogenic differentiation 1 [Source:NCBI gene;Acc:100028550], is expressed in 1 baseline experiment(s);

| ENSMODG00000006749 | ExpressionAtlas

myod1

Project description:Danio rerio myod1, myogenic differentiation 1 [Source:NCBI gene;Acc:30513], is expressed in 1 baseline experiment(s);

| ENSDARG00000030110 | ExpressionAtlas

Myod1

Project description:Rattus norvegicus Myod1, myogenic differentiation 1 [Source:RGD Symbol;Acc:631429], is differentially expressed in 10 experiment(s);

| ENSRNOG00000011306 | ExpressionAtlas

Molecular mechanisms implicated in myogenic differentiation of human alveolar mucosa derived cells

Project description:Different approaches of skeletal muscle cell regeneration originated from progenitor cells are extensively studied under the strategies of muscle tissue pathologies treatment. Recently it was discovered that anatomically localized alveolar mucosa multipotent mesenchymal stromal cells (AMC) are characterized by myogenic potential and high feasibility for muscle tissue recovery and regeneration. Although the resulting multinuclear myotubes are featured by expressing skeletal muscle specific markers (skeletal myosin, actin, myogenin and MyoD1) the exact molecular mechanism controlling differentiation of AMC in myogenic direction is still unclear and poorly scrutinized. In this research we used combination of large-scale transcriptome analysis and bioinformatics approach to appreciate molecular pathways and crucial nodes responsible for myogenic differentiation.

2019-07-13 | GSE134207 | GEO

Myod1

Project description:Mus musculus Myod1, myogenic differentiation 1 [Source:MGI Symbol;Acc:MGI:97275], is differentially expressed in 38 experiment(s);

| ENSMUSG00000009471 | ExpressionAtlas

MYOD1

Project description:Homo sapiens MYOD1, myogenic differentiation 1 [Source:HGNC Symbol;Acc:HGNC:7611], is expressed in 15 baseline experiment(s);

| ENSG00000129152 | ExpressionAtlas

MYOD1

Project description:Sus scrofa MYOD1, myogenic differentiation 1 [Source:VGNC Symbol;Acc:VGNC:90537], is differentially expressed in 1 experiment(s);

| ENSSSCG00000013375 | ExpressionAtlas

MYOD1

Project description:Macaca mulatta MYOD1, myogenic differentiation 1 [Source:VGNC Symbol;Acc:VGNC:75122], is expressed in 1 baseline experiment(s);

| ENSMMUG00000006400 | ExpressionAtlas

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data