Transcriptomics

Dataset Information

0

Expression data from Human MPNST cancer cells infected with G207 and oncolytic HSV


ABSTRACT: We used microarrays to identify genes regulated during oncolytic HSV infection. Oncolytic herpes simplex viruses (oHSV) are promising anticancer therapeutics. We sought to identify alterations in gene expression during oHSV infection of human cancer cells. Human malignant peripheral nerve sheath tumor (MPNST) cells were infected with G207, an ICP34.5-deleted oHSV previously evaluated in clinical trials. G207-infected cells demonstrated massive degradation of cellular mRNAs, while a subset were upregulated. A gene signature of 21 oHSV-induced genes contained 7 genes known to be HSV-induced. Go ontology classification revealed that a majority of upregulated genes are involved in Jak/STAT signaling, transcriptional regulation, nucleic acid metabolism, protein synthesis and apoptosis. Ingenuity-defined functional networks highlighted nodes for AP-1 subunits and interferon signaling via STAT1, SOCS1, SOCS3 and RANTES. Upregulation of SOCS1 correlated with sensitivity of MPNST lines to G207 and depletion of SOCS1 reduced virus replication >1-log. The transcriptome of oHSV-induced genes may predict oncolytic efficacy and provides rationale for next generation oncolytics. Keywords: treated vs non treated

ORGANISM(S): Homo sapiens

PROVIDER: GSE8717 | GEO | 2007/08/08

SECONDARY ACCESSION(S): PRJNA101961

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2008-06-16 | E-GEOD-8717 | biostudies-arrayexpress
2012-04-03 | E-GEOD-29384 | biostudies-arrayexpress
2012-04-04 | GSE29384 | GEO
2021-06-21 | GSE152698 | GEO
| PRJNA101961 | ENA
2011-11-26 | E-GEOD-33881 | biostudies-arrayexpress
2024-06-19 | GSE244829 | GEO
2024-01-29 | GSE246644 | GEO
2024-03-31 | GSE247024 | GEO
2021-06-28 | GSE141438 | GEO