Transcriptomics

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Integrated analysis of genomic and epigenomic regulation of transcriptome identifies molecular subtypes of liver cancer (gene expression)


ABSTRACT: We profiled DNA copy numbers, DNA methylation, and mRNA expression levels in the same HCC patients. To identify genes which transcriptional expression levels are regulated by genomic and/or epigenetic deregulation, we defined the copy number-correlated and methylation-correlated genes with their corresponding gene expression levels across the samples as genic and epigenetic deregulators, respectively.

ORGANISM(S): Homo sapiens

PROVIDER: GSE87630 | GEO | 2017/10/05

SECONDARY ACCESSION(S): PRJNA345436

REPOSITORIES: GEO

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