Transcriptomics

Dataset Information

0

β2→1-fructans modulate the immune system in vivo in a microbiota-dependent and -independent fashion


ABSTRACT: It has been shown in vitro that only specific dietary-fibers contribute to immunity but studies in vivo are not conclusive. Here we investigated degree of polymerization (DP) dependent effects of β2→1-fructans on immunity via microbiota-dependent and -independent effects. To this end, conventional or germ-free mice received short- or long-chain β2→1-fructan for 5 days. Immune cell populations in the spleen, mesenteric lymph nodes (MLN), and Peyer's patches (PPs) were analyzed with flow cytometry, genome-wide gene expression in the ileum was measured with microarray, and gut microbiota composition was analyzed with 16S rRNA sequencing of fecal samples. We found that β2→1-fructans modulated immunity by both microbiota and microbiota-independent effects. Moreover, effects were dependent on the chain-length of the β2→1-fructans type polymer. Both short- and long-chain β2→1-fructans enhanced T-helper 1 cells in Peyer's patches, whereas only short-chain β2→1-fructans increased regulatory T cells and CD11b-CD103- DCs in the MLN. A common feature after short- and long-chain β2→1-fructan treatment was enhanced Fut2 expression and other IL-22-dependent genes in the ileum of conventional mice. These effects were not associated with shifts in gut microbiota composition, or altered production of short-chain fatty acids. Both short- and long-chain β2→1-fructans also induced immune effects in germ-free animals, demonstrating direct effect independent from the gut microbiota. Also, these effects were dependent on the chain-length of the β2→1-fructans. Short-chain β2→1-fructan induced lower CD80 expression by CD11b-CD103- DCs in PPs, whereas long-chain β2→1-fructan specifically modulated B cell responses in germ-free mice. In conclusion, support of immunity is determined by the chemical structure of β2→1-fructans and is partially microbiota-independent.

ORGANISM(S): Mus musculus

PROVIDER: GSE94516 | GEO | 2018/03/22

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2022-04-04 | PXD030078 | Pride
2017-09-19 | E-MTAB-5101 | biostudies-arrayexpress
2014-09-01 | E-GEOD-58087 | biostudies-arrayexpress
2013-04-30 | E-GEOD-37675 | biostudies-arrayexpress
2014-09-01 | E-GEOD-58085 | biostudies-arrayexpress
2013-04-30 | GSE37675 | GEO
2024-05-13 | GSE266602 | GEO
2014-09-01 | E-GEOD-58089 | biostudies-arrayexpress
2023-05-08 | GSE231602 | GEO
2019-07-22 | E-MTAB-7132 | biostudies-arrayexpress