Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Light and BcLTF3-dependent gene expression profiles in the phytopathogenic fungus Botrytis cinerea

ABSTRACT: Full transcriptomes of the Botrytis cinerea wild-type strain B0510 and the null-mutant deltaBcLTF3, cultured in continuous darkness or submitted to a light stimulation, were compared to identify light- or/and BcLTF3-dependent genes.

ORGANISM(S): Botrytis cinerea

PROVIDER: GSE95738 | GEO | 2017/03/07

SECONDARY ACCESSION(S): PRJNA378241

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Light and BcLTF2-dependent gene expression profiles in the phytopathogenic fungus Botrytis cinerea

2016-06-01 | GSE79679 | GEO

Light and BcLTF1-dependent gene expression profiles in the phytopathogenic fungus Botrytis cinerea

2013-09-27 | GSE51192 | GEO

Light and BcLTF2-dependent gene expression profiles in the phytopathogenic fungus Botrytis cinerea

Project description:Full transcriptomes of the Botrytis cinerea wild-type strain B0510 and the null-mutant deltaBcLTF2, cultured in continuous darkness or submitted to a light stimulation, were compared to identify light- or/and BcLTF2-dependent genes. The Botrytis cinerea wild-type strain and the null-mutant deltaBcLTF2 were cultured for 54h in continuous darkness ; then, cultures were exposed for 60 min to light before harvest (L) or were harvested after additional 60 min darkness (D). 4 replicates were performed. The 12 total-RNA samples (4 conditions* 3 replicates) were used for hybridization on NimbleGen 4plex gene expression arrays (20,885 gene models from Botrytis cinerea with three 60-mer probes per gene).

2016-06-01 | E-GEOD-79679 | biostudies-arrayexpress

Light and BcLTF1-dependent gene expression profiles in the phytopathogenic fungus Botrytis cinerea

Project description:Full transcriptomes of the Botrytis cinerea wild-type strain B0510 and the null-mutant deltaBcLTF1, cultured in continuous darkness or submitted to a light stimulation, were compared to identify light- or/and BcLTF1-dependent genes. The Botrytis cinerea wild-type strain and the null-mutant deltaBcLTF1 were cultured for 52h in continuous darkness ; then, cultures were exposed for 60 min to light before harvest (L) or were harvested after additional 60 min darkness (D). 4 replicates were performed. The 16 total-RNA samples (4 conditions* 4 replicates) were used for hybridization on NimbleGen 4plex gene expression arrays (20,885 gene models from Botrytis cinerea with three 60-mer probes per gene).

2013-09-27 | E-GEOD-51192 | biostudies-arrayexpress

Gene expression profiles in ML medium for the phytopathogenic fungus Botrytis cinerea

Project description:Full transcriptome of the Botrytis cinerea wild-type strain B0510, grown in ML medium, was studied.

2021-12-04 | GSE162838 | GEO

Gene expression profiles of 4 non-pathogenic mutants in the phytopathogenic fungus Botrytis cinerea

Project description:Full transcriptomes of the Botrytis cinerea wild-type strain B0510 and 4 non-pathogenic mutants, grown in a cucumber liquid medium, were compared to identify differentially expressed genes.

2019-11-15 | GSE134112 | GEO

The VELVET complex in the gray mold fungus Botrytis cinerea: impact of BcLAE1 on differentiation, secondary metabolism and virulence

2015-02-01 | GSE63021 | GEO

The VELVET complex in the gray mold fungus Botrytis cinerea: impact of BcLAE1 on differentiation, secondary metabolism and virulence

Project description:Full transcriptomes of the Botrytis cinerea wild-type strain B0510 and the null-mutants deltaBcVEL1 and deltaBcLAE1, cultured onto solid grape juice medium with cellophane overlays , were compared to identify BcVEL1 or/and BcLAE1-dependent genes. The Botrytis cinerea wild-type strain and the null-mutants deltaBcVEL1 and BcLAE1 were cultured for 48h onto solid grape juice medium with cellophane overlays. 4 replicates were performed. The 12 total-RNA samples (3 strains* 4 replicates) were used for hybridization on NimbleGen 4plex gene expression arrays (20,885 gene models from Botrytis cinerea with three 60-mer probes per gene).

2015-02-01 | E-GEOD-63021 | biostudies-arrayexpress

Analysis of the molecular dialogue between Botrytis cinerea and Vitis vinifera reveals a clear shift in defence mechanisms during berry ripening.

Project description:Full transcriptomes of the Botrytis cinerea wild-type strain B0510 inoculated on mature grapevine berries (Marselan cultivar) at 16h, 24h, 48h, and in vitro were compared to identify B. cinerea genes diffentially expressed during the infection stages.

2015-08-10 | GSE65559 | GEO

Proteome-wide Analysis of Lysine 2-hydroxyisobutyrylation in the Phytopathogenic Fungus Botrytis cinerea

Project description:Lysine 2-hydroxyisobutyrylation , a recently discovered post-translational modification, plays a key role in the regulation of diverse cellular processes. Botrytis cinerea is a destructive necrotrophic fungal pathogen distributed worldwide with broad ranging hosts. However, the functions of Lysine 2-hydroxyisobutyrylation are unknown in B. cinerea or any other plant fungal pathogens

2020-09-07 | PXD021059 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data