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Coupling of microRNA-directed phasiRNA generation with alternative splicing in small RNA-mediated gene silencing

ABSTRACT: Purpose:We aimed to characterize genome-widely the miRNA population and phasiRNA-generating genes/loci in litchi (Litchi chinensis). Multiple high throughput sequencing strategies, including sRNA sequencing, parallel analysis of RNA ends (PARE) sequencing, and strand-specific RNA-seq, were applied in combination with thorough bioinformatics analyses using a variety of computational methods.

ORGANISM(S): Litchi chinensis

PROVIDER: GSE98698 | GEO | 2018/12/20

REPOSITORIES: GEO

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