Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Gene expression analysis of RNAs isolated from TPEN-untreated and TPEN-treated human keratinocytes

ABSTRACT: In order to identify the zinc responsive genes, we performed a gene expression microarray analysis for the RNAs isolated from TPEN-untreated and TPEN-treated human keratinocytes

ORGANISM(S): Homo sapiens

PROVIDER: GSE99204 | GEO | 2017/10/05

SECONDARY ACCESSION(S): PRJNA387554

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Gene expression analysis of RNAs isolated from C646-untreated and C646-treated human keratinocytes

Project description:In order to identify the zinc responsive genes, we performed a gene expression microarray analysis for the RNAs isolated from C646-untreated and C646-treated human keratinocytes

2018-04-19 | GSE106576 | GEO

Gene expression analysis of RNAs isolated from TSA-untreated and TSA-treated human keratinocytes

Project description:In order to identify the TSA responsive genes, we performed a gene expression microarray analysis for the RNAs isolated from TSA-untreated and TSA-treated human keratinocytes

2018-12-31 | GSE121902 | GEO

Transcriptional response of E. coli to TPEN

Project description:DNA microarrays were used to probe the transcriptional response of E. coli to N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine (TPEN). Fifty-five transcripts were significantly up-regulated including all of the genes that are regulated by Zur and many genes regulated by Fur. In these same TPEN-treated cells, forty-six transcripts were significantly down-regulated. Keywords: E. coli, TPEN, zinc

2006-11-01 | GSE5356 | GEO

Effect of zinc chelator TPEN on gene expression of retinal ganglion cells during optic nerve injury

Project description:Retinal ganglion cells (RGCs) convey the major output of information collected from the eye to the brain. RGCs are irreversibly lost when injured in degenerative diseases such as glaucoma; this failure can be partially reversed by eliminating the retinal mobile zinc (Zn2+) and leads to substantial axon regeneration. Here, we conducted an mRNA sequencing of flow cytometry-isolated RGCs 3 days after optic nerve injury (NC) with or without TPEN treatment. We identified differentially expressed genes using a cutoff of at least 1.5-fold change and FDR of at least 0.05. We focused on the intersecting genes that were upregulated after NC and recovered in TPEN (TPEN/NC; fold change < -1.5; P < 0.05), namely, TPEN target genes.

2022-11-02 | GSE208777 | GEO

Transcriptional responses of Escherichia coli k12 TPEN

Project description:DNA microarrays were conducted on E. coli K12 cells stressed with 10 μM in N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine (TPEN). Overall, 260 genes varied in expression, 114 up-regulated and 146 down-regulated by Zn deprivation Keywords: TPEN stress Array hybridizations were carried out for three RNA samples prepared from three independent cultures (control or TPEN-treated).

2008-12-31 | E-GEOD-11303 | biostudies-arrayexpress

Gene expression analysis of RNAs isolated from C646-untreated and C646-treated human keratinocytes

Project description:Gene expression analysis of RNAs isolated from C646-untreated and C646-treated human keratinocytes

| PRJNA417270 | ENA

Gene expression analysis of RNAs isolated from TSA-untreated and TSA-treated human keratinocytes

Project description:Gene expression analysis of RNAs isolated from TSA-untreated and TSA-treated human keratinocytes

| PRJNA499013 | ENA

Transcriptional responses of Escherichia coli k12 TPEN

2008-12-31 | GSE11303 | GEO

Homo sapiens

Project description:Gene expression analysis of RNAs isolated from TPEN-untreated and TPEN-treated human keratinocytes

| PRJNA387554 | ENA

Next Generation Sequencing Facilitates Quantitative Analysis of UVB(20mJ/cm2 and 40mJ/cm2) exposed and untreated HaCaT keratinocytes Transcriptomes

Project description:Purpose: To compare the transcriptomes of UVB (20mJ/cm2 and 40mJ/cm2) exposed and untreated HaCaT keratinocytes by RNA-Seq analysis, trying to find differences in gene expression between UVB exposed and untreated of keratinocytes and then elucidate the candidate genes that may play important roles in the differentiation of UVB-induced damage in keratinocytes. Methods: HaCaT keratinocytes were subjected to 20mJ/cm2 and 40mJ/cm2 UVB irradiation. Results: To better understand the effects of UVB (20 mJ/cm2), mRNA-sequecing (n=3) were completed by Novogene Inc. A total 891 differentially expressed genes (DEGs) were identified between UV group and control group with 604 down-regulated and 287 up-regulated. A total of 4036 differentially expressed genes (DEGs) which compared with untreated group were identified by RNA-Seq, which provided abundant data for further analysis.

2019-10-12 | GSE138800 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data