Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

GNPS - Mouse dendritic cell metabolome response to wild-type West Nile virus (WNV-NY)

ABSTRACT: Metabolomic data from 2x105 dendritic cells; West Nile Virus treated, Untreated, Mockulum treated; Time points 0, 4, 8, 12, 24; Two biological replicates

INSTRUMENT(S): GC-MS

ORGANISM(S): Mus Musculus (ncbitaxon:10090)

SUBMITTER: Yoshihiro Kawaoka, Michael Diamond, Katrina Waters, Richard Smith and Thomas Metz

PROVIDER: MSV000079149 | GNPS | Thu Jun 11 12:47:00 BST 2015

SECONDARY ACCESSION(S): PXD002356

REPOSITORIES: GNPS

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Mouse dendritic cell proteome response to wild-type West Nile virus (WNV-NY)

Project description:Proteomics data from 2x105 dendritic cells; West Nile Virus treated, Untreated, Mockulum treated; Time points 0, 4, 8, 12, 24; Two biological replicates

2015-06-11 | MSV000079148 | MassIVE

Mouse dendritic cell metabolome response to wild-type West Nile virus (WNV-NY)

Project description:Metabolomic data from 2x105 dendritic cells; West Nile Virus treated, Untreated, Mockulum treated; Time points 0, 4, 8, 12, 24; Two biological replicates

2015-06-11 | MSV000079149 | MassIVE

Mouse cortical neuron transcriptional response to wild-type West Nile virus (WNV-NY) and mutant virus WNV E218A [mRNA]

Project description:The purpose is to obtain samples for transcriptional analysis in triplicate wells using wild type West Nile virus (WNV NY99 clone 382; WNVWT) and mutant virus (WNVE218A) in mouse cortical neurons. This data set comprises two complete biological replicate experiments conducted in the same conditions and with data processed independently. Primary cortical neurons from C57Bl/6J mouse embryos (age E15) are infected with plasmid-derived wild type West Nile virus NY99 clone 382 (WNVWT) or plasmid-derived isogenic E218A mutant West Nile virus NY99 clone 382 (WNVE218A) with multiplicity of infection (MOI) 250. Three technical replicates were performed at each of 1, 8, 12 and 24 hrs post infection. Time matched mocks done in triplicate are treated with mockulum: cell media concentrated through ultracentrifugation and diluted as virus. mRNA is sampled at all time points; microRNA is sampled at 12 hours post-infection. There were two independent biological replicates of the entire procedure, distinguished by sample name prefixes ('WCN002' and 'WCN003') and the biological_replicate characteristic field.

2015-04-04 | E-GEOD-67473 | biostudies-arrayexpress

Mouse cortical neuron transcriptional response to wild-type West Nile virus (WNV-NY) and mutant virus WNV E218A [mRNA]

2015-04-04 | GSE67473 | GEO

Mouse granule cell neuron transcriptional response to wild-type West Nile virus (WNV-NY) and mutant virus WNV E218A (mRNA)

Project description:The purpose is to obtain samples for transcriptional analysis in triplicate wells using wild type West Nile virus (WNV NY99 clone 382; WNVWT) and mutant virus (WNVE218A) in mouse granule cell neurons. This data set comprises two complete biological replicate experiments conducted in the same conditions and with data processed independently. Granule cell neurons from day 6 C57Bl/6J mouse pups are infected with plasmid-derived wild type West Nile virus NY99 clone 382 (WNVWT) or plasmid-derived isogenic E218A mutant West Nile virus NY99 clone 382 (WNVE218A) with multiplicity of infection (MOI) 250. Three technical replicates were performed at each of 1, 8, 12 and 24 hrs post infection. Time matched mocks done in triplicate are treated with mockulum: cell media concentrated through ultracentrifugation and diluted as virus. mRNA is sampled at all time points; microRNA is sampled at 12 hours post-infection. There were two independent biological replicates of the entire procedure, distinguished by sample name prefixes ('WGCN002' and 'WGCN003') and the biological_replicate characteristic field.

2015-04-29 | E-GEOD-68380 | biostudies-arrayexpress

Mouse granule cell neuron transcriptional response to wild-type West Nile virus (WNV-NY) and mutant virus WNV E218A (microRNA)

Project description:The purpose is to obtain samples for transcriptional analysis in triplicate wells using wild type West Nile virus (WNV NY99 clone 382; WNVWT) and mutant virus (WNVE218A) in mouse granule cell neurons. This data set comprises two complete biological replicate experiments conducted in the same conditions and with data processed independently. Granule cell neurons from day 6 C57Bl/6J mouse pups are infected with plasmid-derived wild type West Nile virus NY99 clone 382 (WNVWT) or plasmid-derived isogenic E218A mutant West Nile virus NY99 clone 382 (WNVE218A) with multiplicity of infection (MOI) 250. Three technical replicates were performed at each of 1, 8, 12 and 24 hrs post infection. Time matched mocks done in triplicate are treated with mockulum: cell media concentrated through ultracentrifugation and diluted as virus. mRNA is sampled at all time points; microRNA is sampled at 12 hours post-infection. There were two independent biological replicates of the entire procedure, distinguished by sample name prefixes ('WGCN002' and 'WGCN003') and the biological_replicate characteristic field.

2015-04-29 | E-GEOD-68381 | biostudies-arrayexpress

Mouse granule cell neuron transcriptional response to wild-type West Nile virus (WNV-NY) and mutant virus WNV E218A (microRNA)

2015-04-29 | GSE68381 | GEO

Mouse granule cell neuron transcriptional response to wild-type West Nile virus (WNV-NY) and mutant virus WNV E218A (mRNA)

2015-04-29 | GSE68380 | GEO

GNPS - Mouse dendritic cell lipidome response to wild-type West Nile virus (WNV-NY)

Project description:Lipidomic data from 2x105 dendritic cells; West Nile Virus treated, Untreated, Mockulum treated; Time points 0, 4, 8, 12, 24; Two biological replicates

2015-06-11 | MSV000079150 | GNPS

Mouse cortical neuron transcriptional response to wild-type West Nile virus (WNV NY99 clone 382) and mutant virus WNV E218A [microRNA]

2015-04-04 | E-GEOD-67474 | biostudies-arrayexpress