Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

GNPS_V229

ABSTRACT: Skin_associated_bacteria_from_Panamanian_frogs_(unpublished data) Please, use this data with confidentiality that it is an unpublished data for my thesis.

INSTRUMENT(S): micrOTOF-Q II

ORGANISM(S): Pseudomonas Cichorii (ncbitaxon:36746)

SUBMITTER: Marcelino Gutierrez/Pieter Dorrestein

PROVIDER: MSV000079374 | GNPS | Wed Nov 11 07:12:00 GMT 2015

REPOSITORIES: GNPS

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

GNPS_V229

Project description:Skin_associated_bacteria_from_Panamanian_frogs_(unpublished data) Please, use this data with confidentiality that it is an unpublished data for my thesis.

2015-11-11 | MSV000079375 | GNPS

16s Sequenze analysis

Project description:unpublished

| PRJEB24973 | ENA

Project description:Resistflow-WWTPs-16S DNA data (unpublished)

| PRJEB24492 | ENA

Hawaiian Coral Metabolome Project

Project description:This data comes from coral samples taken during four years in Hawaii. We identified a class of lipids which predicts differences in coral bleaching phenotype across time. This data is unpublished yet and any use have to be informed to their corresponding PIs.

2020-04-10 | MSV000085272 | MassIVE

Expression profiling of E. coli K-12 MG1655

Project description:Previously unpublished expression data from E. coli K-12 MG1655 involved in the creation of a large RNAseq database.

2019-12-17 | GSE122211 | GEO

Gene expression profiles of 400 siRNA knocked down on HUVEC

Project description:Gene regulatory networks inferred from RNA abundance data have generated significant interest. Several high-profile studies have suggested that gene networks may be useful for identifying molecular pathways related to development, human disease and drug action. However despite, this potential, gene network approaches are used relatively infrequently and their use generally requires input from specialist bioinformaticians. To make their use and evaluation more accessible to non-specialist bioinformaticians and to laboratory scientists, we have assembled a comprehensive but easily used suite of tools for the generation and evaluation of gene regulatory networks, applicable to both microarray and RNA-seq data. We illustrate the use of these tools with two previously unpublished microarray datasets generated in primary human endothelial cells by 400 siRNA-mediated knockdowns. Using these tools and data sets, we reverse-engineered a range of different types of transcriptional regulatory network model, and compared these networks with known molecular pathways reported in the literature.

2011-11-29 | GSE27869 | GEO

AP-MS of helicase Upf1 in PC12 cells

Project description:DNA/RNA helicase Upf1 seems to interact with axonal transcripts in response to nerve growth factor (NGF, A. Ludanyi, M. Gaspari and A. Riccio, unpublished data). In order to shed light on Upf1 mechanism of action and to identify potential associations with molecules having cleavage activity, we performed an AP-MS experiment comprising Upf1 immunoprecipitation, on-beads digestion, isotopic labelling (18O) and quantitative LC-MS/MS analysis.

2021-09-10 | PXD023586 | Pride

Test MassIVE Dataset for Metadata and License

Project description:Test dataset with example metadata and license file. Non-commercial license is granted to use this data. Attribution is required. Please see the attached license file prior to using the data

2024-03-28 | MSV000094430 | MassIVE

GNPS - Hawaiian Coral Metabolome Project

2020-04-10 | MSV000085272 | GNPS

Salmonella gene expression in vivo

Project description:For further information on this study please see http://www.sanger.ac.uk/resources/downloads/bacteria/salmonella.html This data is part of a pre-publication release. For information on the proper use of pre-publication data shared by the Wellcome Trust Sanger Institute (including details of any publication moratoria), please see http://www.sanger.ac.uk/datasharing/

2015-07-21 | E-ERAD-78 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data