Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

GNPS - SD Beach survey Oct 2018 DOM

ABSTRACT: Non-Targeted LC-MS/MS analysis of PPl extracts from San Diego Beaches form Oct 2018.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Environmental Samples <bacillariophyta> (ncbitaxon:33858)

SUBMITTER: Daniel Petras

PROVIDER: MSV000085786 | GNPS | Mon Jul 20 14:24:00 BST 2020

REPOSITORIES: GNPS

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

GNPS - SD Beach survey 2017/2018 DOM 1

Project description:Non-Targeted LC-MS/MS analysis of PPl extracts from San Diego Beaches 2017/2018.

2018-04-26 | MSV000082312 | GNPS

DOM LC-MS/MS Interlab Comparison 2020 COMPILED Dataset

Project description:Interlab Study of LC-MS/MS analyis of Marine Dissolved Organic Matter from SIO Pietr (San Diego, California, USA) and algae extracts, extracted via PPL SPE

2022-02-11 | MSV000088823 | MassIVE

Project description:San Diego Seagrass

| PRJNA483963 | ENA

GNPS DOM LC-MS/MS Interlab Comparison 2020 COMPILED Dataset

Project description:Interlab Study of LC-MS/MS analyis of Marine Dissolved Organic Matter from SIO Pietr (San Diego, California, USA) and algae extracts, extracted via PPL SPE

2022-02-11 | MSV000088823 | GNPS

Enviornmental Metabolomics ECOHAB 2024 DOM / POM

Project description:Non-targeted LC-MS/MS analysis of DOM and POM samples form the Pacific Ocean (Californian off-shore) taken via PPL solid-phase extraction and GFF filtering.

2024-07-19 | MSV000095392 | MassIVE

Transcriptomic profiling of choroid plexus in experimental autoimmune encephalomyelitis

Project description:Multiple sclerosis (MS) is a demyelinating disease causing major neurological disability in young adults. We characterized the transcriptome of the choroid plexus (CP), which is part of the blood-brain barriers and the major site of cerebrospinal fluid (CSF) production, in the experimental autoimmune encephalomyelitis mouse model of MS. Genes encoding for adhesion molecules, chemokines and cytokines displayed the most altered expression, supporting the CP as a site of immune-brain interaction in MS. The gene encoding for lipocalin 2 (LCN2) was the most up-regulated, and CSF LCN2 levels coincided with the phases of active disease. Total RNA was isolated with Trizol (Invitrogen, Carlsbad, CA, USA) following the manufacturer’s instructions. After quality assessment using the Agilent Bioanalyzer (Agilent Technologies, CA, USA), 100ng of total RNA from 3 pooled controls and 3 or 2 pooled samples of each experimental autoimmune encephalomyelitis (EAE) phase were amplified and labelled with the Illumina TotalPrep RNA Amplification Kit (Illumina Inc., San Diego, CA, USA). The labeled cRNA was then hybridized using the recommended protocol in a total of two Illumina Whole-Genome MouseRef-8 expression Beadchips (Illumina Inc., San Diego, CA, USA).

2012-06-29 | E-GEOD-35363 | biostudies-arrayexpress

GNPS - DOM SIO Pier 10904

Project description:Metabolic LC-MS/MS profiles from water samples from the SIO Pier, San Diego, USA

| MSV000080176 | GNPS

GNPS - DOM SIO Pier 160801

Project description:Metabolic LC-MS/MS profiles from water samples from the SIO Pier, San Diego, USA

2016-08-03 | MSV000080015 | GNPS

GNPS - Non-targted MS/MS of Seaspray Aerosols amd DOM from BEAST 2018 experiment

Project description:Non-targeted LC-MS/MS of PPL SPE extracted seawater and aerosol samples from BEAST 2018 mesocosm experiment.

2021-03-04 | MSV000087005 | GNPS

GNPS - DOM SIO Pier Time-line

Project description:Metabolic LC-MS/MS profiles from water samples from the SIO Pier, San Diego, USA