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GNPS - Transfer of the high-quality sugar metabolic model of Aspergillus niger is reliable within the same fungal phylum, but limited for fungi of other phyla

ABSTRACT: Validation of metabolic models, extrapolated from the reference sugar catabolism genetic network of Aspergillus niger by using an orthology-based approach, of evolutionarily diverse fungi.

INSTRUMENT(S): Agilent 7890A GC with 5975C inert XL MSD

ORGANISM(S): Trichoderma Reesei (ncbitaxon:51453) Penicillium Subrubescens (ncbitaxon:1316194) Aspergillus Niger (ncbitaxon:5061) Phanerochaete Chrysosporium Rp-78 (ncbitaxon:273507) Aspergillus Nidulans (ncbitaxon:162425)

SUBMITTER: Ronald de Vries

PROVIDER: MSV000090441 | GNPS |

REPOSITORIES: GNPS

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The Sugar Metabolic Model of Aspergillus niger Can Only Be Reliably Transferred to Fungi of Its Phylum.

Li Jiajia J Chroumpi Tania T Garrigues Sandra S Kun Roland S RS Meng Jiali J Salazar-Cerezo Sonia S Aguilar-Pontes Maria Victoria MV Zhang Yu Y Tejomurthula Sravanthi S Lipzen Anna A Ng Vivian V Clendinen Chaevien S CS Tolić Nikola N Grigoriev Igor V IV Tsang Adrian A Mäkelä Miia R MR Snel Berend B Peng Mao M de Vries Ronald P RP

Journal of fungi (Basel, Switzerland) 20221217 12

Fungi play a critical role in the global carbon cycle by degrading plant polysaccharides to small sugars and metabolizing them as carbon and energy sources. We mapped the well-established sugar metabolic network of Aspergillus niger to five taxonomically distant species (Aspergillus nidulans, Penicillium subrubescens, Trichoderma reesei, Phanerochaete chrysosporium and Dichomitus squalens) using an orthology-based approach. The diversity of sugar metabol ...[more]

PMID: 36547648

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Transfer of the high-quality sugar metabolic model of Aspergillus niger is reliable within the same fungal phylum, but limited for fungi of other phyla

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