Metabolomics

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GNPS - The core metabolome and root exudation dynamics of three phylogenetically distinct plant species


ABSTRACT: Root tissues, shoot tissues and root exudates were collected from hydroponically grown B. distachyon, M. truncatula and A. thaliana. Metabolites were extracted and analyzed by LCMS. Metabolites were separated on an Agilent 1290 stack using an Agilent InfinityLab Poroshell 120 HILIC-Z column (2.1 x 150 mm, 2.7 um). Detection was performed using a Thermo QExactive hybrid quadrupole-orbitrap mass spectrometer. This data is has been incorporated into a manuscript (in preparation as of Dec 14, 2022): The core metabolome and root exudation dynamics of three phylogenetically distinct plant species Sarah McLaughlin 1,2,3 , Kateryna Zhalnina 1,2 , Suzanne Kosina 1 , Trent R. Northen 1,2 *, Joelle Sasse 1,2, 3 * *corresponding authors: trnorthen@lbl.gov, jsasse@botinst.uzh.ch 1 Lawrence Berkeley National Laboratory, Environmental Genomics and Systems Biology, 1 Cyclotron Road, Berkeley, CA, 94720, USA 2 Joint Genome Institute, National Laboratory, Environmental Genomics and Systems Biology, 1 Cyclotron Road, Berkeley, CA, 94720, USA 3 current address: Institute for Plant and Microbial Biology, University of Zurich, 8008 Zurich, Switzerland

INSTRUMENT(S): Q Exactive

ORGANISM(S): Medicago Truncatula (ncbitaxon:3880) Arabidopsis Thaliana (ncbitaxon:3702) Brachypodium Distachyon (ncbitaxon:15368)

SUBMITTER: Trent Northen  

PROVIDER: MSV000090869 | GNPS | Thu Dec 08 15:15:00 GMT 2022

REPOSITORIES: GNPS

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