GNPS - Understanding the molecular mechanisms of drought tolerance in wild soybean (Glycine soja) through multi-omics-based alternative splicing predictions
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ABSTRACT: This work is managed by Pf Jae Yoon Kim from Kongju National University of South Korea.
Project description:This data analyzes gene expression patterns in Arabidopsis whitening mutants, wn1, with defects in chloroplast development. We found that wn1 was a T-DNA insertion line of Arabidopsis AtPTAC10/PAP3 (At3g48500) and exhibited a lethal, albino-like phenotype in the seedling stages. pTAC10 was known as a component of RNA polymerase complex called plastid-encoded RNA polymerase, PEP, in mature chloroplasts. Because wn1 mutants were lethal, we extracted RNA from cotyledons of 7-day-old seedlings from wn1 mutants and Col-0. RNA seq analysis was commissioned by NICEM in Seoul National University, Korea and transcriptome resequencing was confirmed in Macrogen, Korea. Through analysis, we compared gene expression patterns of wn1 mutant and Col-0 seedlings.
Project description:Agelena koreana is indigenous spider in South Korea that lives on piles of trees building webs. RNA-sequencing was performed for venom gland tissue and whole body except venom gland.
Project description:A LC-MS/MS (Data-dependent acquisition in negative ion mode) dataset from Lichen extracts acquired from Korean Lichen Research Institute, Sunchon National University, Suncheon, South Korea.
Project description:A LC-MS/MS (Data-dependent acquisition in negative ion mode) dataset from Lichen extracts acquired from Korean Lichen Research Institute, Sunchon National University, Suncheon, South Korea.