Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Human feces metaproteome from 81 persons

ABSTRACT: Metaproteome analysis of feces samples derived from 81 persons, including patient and healthy subjects.

ORGANISM(S): Homo Sapiens (human)

SUBMITTER: Yasushi Ishihama

PROVIDER: PXD010754 | JPOST Repository | Sat Aug 10 00:00:00 BST 2019

REPOSITORIES: jPOST

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	171004ito_no12_1.raw	Raw
	171004ito_no12_2.raw	Raw
	171004ito_no12_3.raw	Raw
	171004ito_no12_4.raw	Raw
	171004ito_no12_5.raw	Raw

Items per page:

1 - 5 of 20

Similar Datasets

Correlation analysis between gut microbiota characteristics and melasma

Project description:To compare the similarities and differences in species diversity of the gut microbiota between the patients with melasma and healthy subjects. The feces were collected for 16S rRNA sequencing analysis of the gut microbiota.

2022-10-25 | GSE214430 | GEO

human oral metagenome

Project description:Subgingival samples from Healthy / Periodontitis subjects Targeted Locus (Loci)

| PRJNA274944 | ENA

Autoantibodies as diagnostic biomarkers for the detection, subtyping, and progression of Multiple Sclerosis

Project description:Human serum samples from Multiple Sclerosis (MS) subjects and healthy control subjects were probed onto human protein microarrays in order to identify differentially expressed autoantibody biomarkers that could be used as diagnostic indicators. Other neurodegenerative and non-neurodegenerative diseases were also used to help measure the specificity of the selected biomarkers.

2017-07-26 | GSE95718 | GEO

human oral metagenome

Project description:Metgenomic analysis of human saliva microbiome from healthy subjects

| PRJDB5315 | ENA

human oral metagenome

Project description:Metgenomic analysis of human saliva microbiome from healthy subjects

| PRJDB4115 | ENA

Cytokine interactome alterations promote oropharyngeal Epstien-barr virus (EBV) replication and shedding during HIV infection

Project description:Proteomic analysis of cytokines in unstimulated oropharyngeal secretions. Epstein-barr virus (EBV) is a type 1 carcinogen which causes many cancers in humans. Here we explored the cytokine involvement of the EBV replication process in the oropharynx. Cytokine interactomic profiles were geneerated to understand the involved signalling pathways in HIV infected group and the healthy group. Proteome profilers were used to understand the major cytokine expression levels that are related to infection and immune regulation. We analyzed unstimulated oropharyngeal samples (UOPS) from 42 healthy subjects and 72 HIV positive subjects using the R & D Proteome Profiler array panels. No techinical replicates were performed. 14 samples in HIV group without therapy (NHAART group); 58 HIV patients with highly active antiretroviral therapy (HAART group); 42 samples in healthy group

2010-04-15 | E-GEOD-21339 | biostudies-arrayexpress

Detection of circadian gene expression in human epidermal suction blister samples

Project description:To detect time of day dependent gene expression in human epidermis suction blister samples from 20 healthy subjects were obtained at three different time points throughout the day. RNA from 20 subjects were used to perform whole genome microarray analysis. Microarrays from 19 subjects showed sufficient quality to perform analysis for differential gene expression. We detected significant differential expression levels for several canonical clock genes such as Per1, Per2, Per3, Bmal1 and Rev-Erb_alpha throughout the day. In total we identified 294 genes that showed significant circadian gene expression including several transcription factors and rate limiting enzymes. To our knowledge this is the first study to investigate genome wide circadian gene expression in human epidermis.

2012-07-31 | GSE35635 | GEO

Metabolomics analysis of colon adenoma in African Americans

Project description:This NMR Metabolomics analysis was performed on feces samples derived from healthy (n = 10) and adenoma (n = 10) African American subjects with the goal of identifying perturbations in metabolomics profiles in colon cancer.

| ST000366 | MetabolomicsWorkbench

Gain-of-function Variants in SMAD4 compromise Respiratory Epithelial cells

Project description:To investigate how SMAD4 mutations associated with Myhre syndrome impact SMAD4 protein levels, activation and physiological functions in patient derived nasal epithelial cells. We derived primary nasal basal stem cells from inferior turbinate brushings of healthy subjects and Myhre syndrome patients (SMAD4-Ile500Val, Arg496Cys, Ile500Thr). After ALI differentiation, RNA was collected from healthy nasal basal epithelial cells and Myhre syndrome-epithelial cells to perform mRNA Deep sequencing. We then performed gene expression profiling analysis using data obtained from RNA-seq.

2024-07-01 | GSE270668 | GEO

human gut metagenome

Project description:microbiota of the feces obtained from 16 Japanese alcoholic patients and 40 healthy Japanese subjects

| PRJDB4064 | ENA