Proteomics

Dataset Information

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SJIA serum proteome profiling with DIA-MS


ABSTRACT: We performed a DIA-MS proteomic analysis of sera from systemic juvenile idiopathic arthritis with different activity phases using a high protein depletion process. We profiled the proteins in the sera that differed significantly in their activity phase.

ORGANISM(S): Homo Sapiens (human)

SUBMITTER: Hironori Sato, Department of Pediatrics, Graduate School of Medicine, Chiba University, Chiba 

PROVIDER: PXD030413 | JPOST Repository | Tue Apr 26 00:00:00 BST 2022

REPOSITORIES: jPOST

Dataset's files

Source:
Action DRS
sJIAserum_MAS1.raw Raw
sJIAserum_MAS2.raw Raw
sJIAserum_MAS3.raw Raw
sJIAserum_MAS4.raw Raw
sJIAserum_MAS5.raw Raw
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Publications

In-Depth Serum Proteomics by DIA-MS with <i>In Silico</i> Spectral Libraries Reveals Dynamics during the Active Phase of Systemic Juvenile Idiopathic Arthritis.

Sato Hironori H   Inoue Yuzaburo Y   Kawashima Yusuke Y   Nakajima Daisuke D   Ishikawa Masaki M   Konno Ryo R   Nakamura Ren R   Kato Daigo D   Mitsunaga Kanako K   Yamamoto Takeshi T   Yamaide Akiko A   Tomiita Minako M   Hoshioka Akira A   Ohara Osamu O   Shimojo Naoki N  

ACS omega 20220215 8


In serum proteomics using mass spectrometry, the number of detectable proteins is reduced due to high-abundance proteins, such as albumin. However, recently developed data-independent acquisition mass spectrometry (DIA-MS) proteomics technology has made it possible to remarkably improve the number of proteins in a serum analysis by removing high-abundance proteins. Using this technology, we analyzed sera from patients with systemic juvenile idiopathic arthritis (sJIA), a rare pediatric disease.  ...[more]

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