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Shortgun Proteomic analysis of two Bartonella quintana strains

ABSTRACT: Proteomic analysis two strains of Bartonella quintana using In-solution digestion followed by Stron Cation Exchange (SCX) and RP nano-LC-MS/MS

INSTRUMENT(S): QSTAR XL, MS:1000031

ORGANISM(S): Bartonella Quintana Jk 31 (ncbitaxon:1134506) Bartonella Quintana (ncbitaxon:803)

SUBMITTER: None Listed

PROVIDER: MSV000079310 | MassIVE |

REPOSITORIES: MassIVE

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Shotgun proteomic analysis of two Bartonella quintana strains.

Fabietti Alessandra A Gaspari Marco M Krishnan Shibu S Quirino Angela A Liberto Maria Carla MC Cuda Giovanni G Focà Alfredo A

Proteomics 20130315 8

This study reports the first extensive shotgun analysis of the Bartonella quintana proteome. Proteins extracted from two B. quintana strains, Oklahoma and JK31, were analyzed in triplicate analyses by a bottom-up approach consisting of tryptic digestion in SDS-containing buffer, strong cation-exchange StageTip fractionation, and nano-LC-MS/MS analysis. By setting spectral false discovery rate below 0.5%, 548 unique proteins were identified overall, of which 409 protein identifications were share ...[more]

PMID: 23450663

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