Proteomics

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Hendra virus infection of bat (Pteropus alecto) and human cells


ABSTRACT: SILAC labeled human kidney cells (293 cells) or bat kidney cells (PakiT03cells)were infected with Hendra virus for 8 or 24 hours and compared to uninfected control cells. Protein identification and quantitation relied on a combination of Uniprot lists of proteins and Proteomics Informed by Transcriptomics (PIT) analysis whereby RNA extracted from the same samples was deep sequenced and the sequencing data was used to construct mRNA from which possible ORFS were inferred and used as a search space by MaxQuant.

INSTRUMENT(S): LTQ Orbitrap Velos

ORGANISM(S): Hendra Virus Horse/australia/hendra/1994 (ncbitaxon:928303) Homo Sapiens (ncbitaxon:9606) Pteropus Alecto (ncbitaxon:9402)

SUBMITTER: Dr David A Matthews 

PROVIDER: MSV000079832 | MassIVE | Fri Jun 17 09:50:00 BST 2016

SECONDARY ACCESSION(S): PXD001165

REPOSITORIES: MassIVE

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