Dataset Information
Comparison of Lung Cancer Proteome Profiles 1: Label Free Quantification
Ontology highlight
ABSTRACT:
INSTRUMENT(S): Q Exactive
ORGANISM(S): Homo Sapiens (ncbitaxon:9606)
SUBMITTER: 
John Koomen
PROVIDER: MSV000080685 | MassIVE | Mon Mar 27 13:18:00 BST 2017
SECONDARY ACCESSION(S): PXD004682
REPOSITORIES: MassIVE
Publications
Relative protein quantification and accessible biology in lung tumor proteomes from four LC-MS/MS discovery platforms.
Proteomics 20170301 6
Discovery proteomics experiments include many options for sample preparation and MS data acquisition, which are capable of creating datasets for quantifying thousands of proteins. To define a strategy that would produce a dataset with sufficient content while optimizing required resources, we compared (1) single-sample LC-MS/MS with data-dependent acquisition to single-sample LC-MS/MS with data-independent acquisition and (2) peptide fractionation with label-free (LF) quantification to peptide f ...[more]
