Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Deep peptidomics analysis of Drosophila melanogaster

ABSTRACT: A deep peptidomics workflow was used to identify alternative proteins in Drosophila melanogaster samples.

INSTRUMENT(S): Orbitrap Fusion Lumos, LTQ Orbitrap Velos, TripleTOF 6600, Orbitrap Fusion, Q Exactive Plus, Q Exactive

ORGANISM(S): Drosophila Melanogaster (ncbitaxon:7227)

SUBMITTER: Bertrand Fabre

PROVIDER: MSV000088656 | MassIVE | Fri Jan 07 04:06:00 GMT 2022

REPOSITORIES: MassIVE

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Deep sequencing of Drosophila melanogaster small RNAs

Project description:Deep sequencing of Drosophila melanogaster small RNAs

| PRJNA107077 | ENA

CG7358 mutant Drosophila melanogaster sequencing

Project description:To understand the function of gene CG7358 in Drosophila melanogaster, including indentification of those genes whose expression levels or alternative splicing are affected by CG7358.

2018-04-18 | GSE110047 | GEO

Drosophila melanogaster

Project description:Sex-, stage-, and tissue-specific alternative splicing in Drosophila melanogaster

| PRJNA96529 | ENA

Deep sequencing of Drosophila melanogaster small RNAs

Project description:High throughput seqeuncing of small RNAs (PAGE isolated from total RNA or Argonaute immunoprecipitates) from Drosophila melanogaster using the Illumina platform. Adapter ligation requires 5' monophosphate and 3' OH. Full analysis of all libraries in this set is published (Czech B. et al. 2008), leading to the description of endogenous siRNAs in flies. Keywords: Solexa sequences

2008-04-30 | GSE11086 | GEO

Drosophila melanogaster

Project description:Drosophila melanogaster

| PRJNA868356 | ENA

Drosophila melanogaster

Project description:Drosophila melanogaster

| PRJNA448445 | ENA

Profling of the Drosophila melanogaster neuronal microRNA transcriptome by small RNA deep sequencing

Project description:microRNAs (miRNAs) are a class of small non-coding RNAs involved in the coordination and/or fine-tuning of gene expression. As such, miRNAs are thought to be critical cis-acting regulatory factors that control a wide range of physiological processes in the brain. The datasets presented here represent the miRNA transcriptome of the adult and larval Drosophila melanogaster CNS as determined by small RNA deep sequencing (RNA-Seq). They were derived from adult and larval samples explanted from the animal that contain minimal extraneous (non-neuronal) tissues. Here we present a concise summary of our profiling results as well as the original sequencing data. We identify many miRNAs that are expressed at equal levels in both tissues and several that are significantly enriched in the larval and adult brain. Some of these belong to miRNA families with conserved members in mammals. These datasets should provide a good starting point for others interested in characterizing miRNAs with putative functions in Drosophila neurons. The datasets presented here represent the miRNA transcriptome of the adult and larval Drosophila melanogaster CNS as determined by small RNA deep sequencing (RNA-Seq).

2016-05-15 | E-GEOD-57687 | biostudies-arrayexpress

Thermal acclimation in Drosophila melanogaster

Project description:Thermal acclimation study on Drosophila melanogaster reared at 3 different temperatures (12, 25, and 31oC). The proteomic profiles of D. melanogaster under these different temperatures were analyzed and compared using label-free tandem mass spectrometry.

2016-03-15 | PXD003755 | Pride

Drosophila melanogaster eye Proteomics

Project description:Absolute (molar) quantification determines proteins stoichiometry in complexes, networks and metabolic pathways. We employed MS Western workflow to determine molar abundances of proteins critical for morphogenesis and phototransduction (PT) in eyes of Drosophila melanogaster using a single chimeric 264 kDa protein standard that covers, in total, 197 peptides from 43 proteins. Each protein was independently quantified with 2 to 4 proteotypic peptides with the coefficient of variation of less than 15 %, better than 1000-fold dynamic range and sub-femtomole sensitivity. We determined molar abundances and stoichiometric ratios of the components of the PT machinery and the rhabdomere, and how they are changing when rhabdomere morphogenesis is perturbed by genetic manipulation of the evolutionary conserved gene crumbs (crb).

2020-07-19 | PXD018001 | Pride

Drosophila melanogaster

Project description:Drosophila melanogaster Epigenomics

| PRJNA222640 | ENA