Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Pseudomonas aeruginosa derived extracellular vesicles modulate corneal inflammation: a role in microbial keratitis

ABSTRACT: Extarcellular vesicles (EVs) soluble protein (secretome) enriched fractions were collected from overnight culture supernatants of Pseudomonas aeruginosa grown in LB broth using size exclusion chromatography. 954881: B secretome; 954882: B secretome; 954883: B secretome; 954878: B EV; 954879: B EV; 954880: B EV

INSTRUMENT(S): Orbitrap Fusion Lumos

ORGANISM(S): Pseudomonas Aeruginosa Pao1 (ncbitaxon:208964)

SUBMITTER: Danielle Robertson

PROVIDER: MSV000090310 | MassIVE |

REPOSITORIES: MassIVE

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Discerning strain specific beta-lactam drug resistance of P. aeruginosa

Project description:P. aeruginosa isolates were grown in LB broth media. The bacterial media was then digested after incubation for 24 hours and analyzed to identify bacterial proteins related to beta-lactam drug resistance. Bottom-up proteomics analysis was performed.

2018-11-04 | PXD010588 | Pride

PAO1 gene expression at 22°C and 37°C in Lysogeny broth

Project description:Pseudomonas aeruginosa strain PAO1 was grown at 22°C and 37°C in Lysogeny broth (LB) and RNA was hybridized on the Affymetrix P. aeruginosa chip.

2014-01-01 | GSE51409 | GEO

The Indispensible and Global Role of NAD Metabolism for the Lifestyle and Virulence of Pseudomonas aeruginosa

Project description:A knockout of nrtR gene (PA4916) of Pseudomonas aeruginosa leads to the global changes in metabolic profile of the pathogen to its complete avirulence. Bacterial cells of TBCF10839 and TBCF10839nrtR::Tn5 were grown in LB broth to late exponential phase at 37 oC

2014-02-01 | E-GEOD-39867 | biostudies-arrayexpress

Expression data of Pseudomonas aeruginosa cells in planktonic or biofilm mode of growth

Project description:Biofilm formation by Pseudomonas aeruginosa relies on specific changes in gene expression. Some of these genes, for instance, control antibiotic resistance. We used microarrays to detail the global programme of gene expression underlying biofilm formation and identified distinct classes of up-regulated genes during this process. Pseudomonas aeruginosa PAO1 cells were grown as planktonic cells in LB broth for 4 hours (PC4) or 24 hours (PC24) and sessile cels for 24 hours.

2011-06-17 | E-GEOD-30021 | biostudies-arrayexpress

Replication transcriptome of Pseudomonas aeruginosa

Project description:Transcriptiomes of non-replicating, replicating and pre-divisonal P. aeruginosa PA14 FACS subpopulations during replication-coupled growth in LB medium.

2022-11-07 | GSE217100 | GEO

P. aeruginosa PAO1 WT and PA2663 biofilm cells

Project description:P. aeruginosa PAO1 PA2663-UW expression in biofilm cells relative to P. aeruginosa PAO1 WT-UW expression in biofilm cells. All samples cultured in LB with glass wool. Keywords: Mutation

2008-05-29 | GSE7968 | GEO

P. aeruginosa PAO1 PA2663 mutant vs. wild type strain

Project description:P. aeruginosa PAO1 wild type and PA2663 mutant strains expression in biofilm cells relative to P. aeruginosa PAO1 wild type strain expression in biofilm cells. All samples cultured in LB with glass wool Keywords: Biofilm

2008-02-22 | GSE9255 | GEO

Transcriptome dynamics of Pseudomonas aeruginosa during growth in complex medium

Project description:Transcriptiome dynamics of P. aeruginosa PA14 during batch growth in complex LB medium over the course of 10 h.

2021-10-31 | GSE159698 | GEO

SigX ECF sigma factor deletion mutant expression profile in Pseudomonas aeruginosa H103 in LB medium

Project description:Analysis of a SigX knockout mutant of Pseudomonas aeruginosa H103 strain in LB.

2018-12-01 | GSE117438 | GEO

Pseudomonas aeruginosa PA14 wild-type vs the tpbA (PA14_13660) mutant

Project description:Microarray analysis for the biofilm cells of Pseudomonas aeruginosa PA14 wild-type vs the tpbA (PA14_13660) mutant in LB medium at 4 and 7 h at 37C

2009-05-23 | GSE13871 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data