Metabolomics,Multiomics

Dataset Information

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Coordinate Regulation of Metabolite Glycosylation and Stress Hormone Biosynthesis by TT8 in Arabidopsis


ABSTRACT: Secondary metabolites play a key role in coordinating ecology and defense strategies of plants. Diversity of these metabolites arise by conjugation of core structures with diverse chemical moieties, such as sugars in glycosylation. Active pools of phytohormones, including those involved in plant stress response are regulated by glycosylation. While, much is known about glycosylation enzymes, we know little about their regulation or coordination with other biological processes. We characterized the flavonoid pathway transcription factor, TRANSPARENT TESTA 8 (TT8) in Arabidopsis thaliana, using an integrative 'omics strategy to provide a systems level understanding of the cellular machinery used to generate metabolite diversity by glycosylation. Metabolomics analysis of loss-of-function and inducible overexpression lines of TT8 showed that it coordinates glycosylation of not only flavonoids, but also nucleotides, thus, implicating TT8 in regulating pools of activated sugars. Transcriptome and promoter network analyses revealed that TT8 regulome included sugar transporters, sugar binding and sequestration proteins, and carbohydrate active enzymes. Interestingly, TT8 also affects brassinosteroid and jasmonic acid biosynthesis by directly binding to the promoters of key genes of these two pathways. This combined effect on metabolites glycosylation and stress hormones by TT8 overexpression lead to significant increase in tolerance towards multiple abiotic and biotic stresses. Conversely, loss of TT8 leads to increased sensitivity to these stresses. Thus, TT8 is an integrator of secondary metabolism and stress response.

OTHER RELATED OMICS DATASETS IN: PXD006204

INSTRUMENT(S): LTQ Orbitrap Velos (Thermo Scientific), 6540 Q-TOF LC/MS (Agilent)

SUBMITTER: Shivshankar Umashankar 

PROVIDER: MTBLS129 | MetaboLights | 2016-10-03

REPOSITORIES: MetaboLights

Dataset's files

Source:
Action DRS
MTBLS129 Other
FILES Other
a_MTBLS129_tt8_metabolomics_metabolite_profiling_mass_spectrometry-1.txt Txt
a_MTBLS129_tt8_metabolomics_metabolite_profiling_mass_spectrometry.txt Txt
i_Investigation.txt Txt
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Publications

Coordinate Regulation of Metabolite Glycosylation and Stress Hormone Biosynthesis by TT8 in Arabidopsis.

Rai Amit A   Umashankar Shivshankar S   Rai Megha M   Kiat Lim Boon LB   Bing Johanan Aow Shao JA   Swarup Sanjay S  

Plant physiology 20160718 4


Secondary metabolites play a key role in coordinating ecology and defense strategies of plants. Diversity of these metabolites arises by conjugation of core structures with diverse chemical moieties, such as sugars in glycosylation. Active pools of phytohormones, including those involved in plant stress response, are also regulated by glycosylation. While much is known about the enzymes involved in glycosylation, we know little about their regulation or coordination with other processes. We char  ...[more]

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