Metabolomics

Dataset Information

0

Seed Metabolome Analysis of a Transgenic Rice Line Expressing Cholera Toxin B-subunit


ABSTRACT: Rice (Oryza sativa L.) is a candidate crop for production of plant-based vaccines by genetic engineering technologies. MucoRice-CTB has been developed as a rice-seed-based vaccine against cholera by transgenic expression of modified cholera toxin B-subunit (CTB) under the RNA interference (RNAi)-mediated suppression of endogenous seed storage proteins. Here, we performed non-targeted metabolomic profiling of MucoRice-CTB to understand the overall effects of the genetic engineering on rice seed metabolism using gas chromatography/time-of-flight mass spectrometry.

INSTRUMENT(S): GCT Premier (Waters)

SUBMITTER: Takumi Ogawa 

PROVIDER: MTBLS437 | MetaboLights | 2017-08-30

REPOSITORIES: MetaboLights

Dataset's files

Source:
Action DRS
MTBLS437 Other
FILES Other
a_MTBLS437_seed_metabolome_metabolite_profiling_mass_spectrometry.txt Txt
i_Investigation.txt Txt
m_MTBLS437_seed_metabolome_metabolite_profiling_mass_spectrometry_v2_maf.tsv Tabular
Items per page:
1 - 5 of 7
altmetric image

Publications

Seed Metabolome Analysis of a Transgenic Rice Line Expressing Cholera Toxin B-subunit.

Ogawa Takumi T   Kashima Koji K   Yuki Yoshikazu Y   Mejima Mio M   Kurokawa Shiho S   Kuroda Masaharu M   Okazawa Atsushi A   Kiyono Hiroshi H   Ohta Daisaku D  

Scientific reports 20170712 1


Plant-based human vaccines have been actively developed in recent years, and rice (Oryza sativa L.) is one of the best candidate crops for their production and delivery. By expressing a modified cholera toxin B (CTB) subunit, we previously developed MucoRice-CTB, a rice-based vaccine against cholera, which is caused by infection of the intestine with the bacteria Vibrio cholerae. MucoRice-CTB lines have been extensively characterized by whole-genome sequencing and proteome analyses to evaluate t  ...[more]

Similar Datasets

2021-07-04 | GSE175561 | GEO
2016-01-26 | PXD002740 | Pride
2013-08-20 | E-GEOD-49963 | biostudies-arrayexpress
2021-05-07 | GSE174017 | GEO
2020-11-02 | PXD022093 | Pride
2019-12-13 | GSE141936 | GEO
2022-06-09 | PXD031352 | Pride
2010-05-18 | E-GEOD-16142 | biostudies-arrayexpress
2012-05-01 | GSE37650 | GEO
2013-08-20 | GSE49963 | GEO