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Synechococcus elongatus PCC 7942 = FACHB-805

ABSTRACT: Identification of the related genes for substrain-specific phenotypes by whole-genome resequencing of a cyanobacterium, Synechococcus elongatus PCC 7942

PROVIDER: PRJDB3377 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	DRR029927_1.fastq.gz	Fastqsanger.gz
	DRR029927_2.fastq.gz	Fastqsanger.gz
	DRR029928_1.fastq.gz	Fastqsanger.gz
	DRR029928_2.fastq.gz	Fastqsanger.gz
	DRR029929_1.fastq.gz	Fastqsanger.gz

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Synechococcus elongatus PCC 7942 = FACHB-805

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Synechococcus elongatus PCC 7942 = FACHB-805

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Synechococcus elongatus PCC 7942 = FACHB-805

Project description:Raw sequence reads of Synechococcus elongatus PCC 7942 for nitrogen starvation responses

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Synechococcus elongatus PCC 7942 = FACHB-805 isolate:PCC 7942

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Synechococcus elongatus PCC 7942 = FACHB-805

Project description:Genome-wide changes in the circadian transcriptional program in Synechococcus elongatus PCC 7942

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Transcriptomic and phenomic investigations reveal elements in biofilm repression and formation in the cyanobacterium Synechococcus elongatus PCC 7942 [RNA-seq]

Project description:Biofilm formation by photosynthetic organisms is a complex behavior that serves multiple functions in the environment. Biofilm formation in the unicellular cyanobacterium Synechococcus elongatus PCC 7942 is regulated in part by a set of small secreted proteins that promotes biofilm formation and a self-suppression mechanism that prevents their expression. Little is known about the regulatory and structural components of the biofilms in PCC 7942, or response to the suppressor signal(s). We performed transcriptomics (RNA-Seq) and phenomics (RB-TnSeq) screens that identified four genes involved in biofilm formation and regulation, more than 25 additional candidates that may impact biofilm formation, and revealed the transcriptomic adaptation to the biofilm state. In so doing, we compared the effectiveness of these two approaches for gene discovery.

2022-06-06 | GSE205444 | GEO

Transcriptomic and phenomic investigations reveal elements in biofilm repression and formation in the cyanobacterium Synechococcus elongatus PCC 7942 [RB-TnSeq]

2022-06-06 | GSE205443 | GEO

Expression of OsTPX Gene Improves Cellular Redox Homeostasis and Photosynthesis Efficiency in Synechococcus elongatus PCC 7942

Project description:The goals of this study are to compare hydrogen peroxide (H2O2) stress tolerance through gene expression of wild type (WT) and OsTPX-expressing Synechoccous elongatus PCC 7942 (OT) under the normal and stress condition.

2018-12-26 | GSE122841 | GEO

Synechococcus elongatus PCC 7942 = FACHB-805

Project description:Mutations responsible for alcohol tolerance in the mutant of Synechococcus elongatus PCC 7942 (SY1043) obtained by single-cell screening system

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Transcriptome analysis of Synechococcus elongatus PCC 7942 for nitrogen starvation response using RNA sequencing

Project description:We reported transcriptome analysis of S. elongatus PCC 7942 for nitrogen starvation response by performing RNA-sequencing. As a result, we identified differentially express genes and confirmed physiological response changes for up or down regulation genes. among differentially expressed genes (p value < 0.01) during N starvation

2017-02-14 | GSE79726 | GEO

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