Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Eustoma grandiflorum strain:Bolero White(Cultivar)

ABSTRACT: Mechanism elucidation of growth-promoting under EOD-FR on Eustoma grandiflorum (Raf.) Shinn. by transcriptome analysis

PROVIDER: PRJDB4037 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR087465_1.fastq.gz	Fastqsanger.gz
	DRR087465_2.fastq.gz	Fastqsanger.gz
	DRR087466_1.fastq.gz	Fastqsanger.gz
	DRR087466_2.fastq.gz	Fastqsanger.gz
	DRR087467_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Eustoma grandiflorum

Project description:Mechanism elucidation of growth-promoting under EOD-FR on Eustoma grandiflorum (Raf.) Shinn. by transcriptome analysis

| PRJDB4089 | ENA

Eustoma grandiflorum

Project description:Eustoma grandiflorum raw sequence reads

| PRJNA289957 | ENA

Eustoma grandiflorum

Project description:Eustoma grandiflorum Transcriptome or Gene expression

| PRJNA76609 | ENA

Eustoma grandiflorum strain:10B-620

Project description:Eustoma grandiflorum Genome Sequencing

| PRJDB4870 | ENA

Eustoma grandiflorum

Project description:EST sequencing and microarray analysis of the floral transcriptome of Eustoma grandiflorum

| PRJNA151455 | ENA

Eustoma grandiflorum rhizospheric microorganism

Project description:Eustoma grandiflorum rhizospheric microorganism Raw sequence reads

| PRJNA588678 | ENA

Eustoma grandiflorum strain:Shihai

Project description:Eustoma grandiflorum Shihai 2011 Genome Sequencing Project

| PRJDB10307 | ENA

Eustoma grandiflorum rhizospheric microorganism

Project description:Eustoma grandiflorum rhizospheric microorganism Raw sequence reads

| PRJNA588674 | ENA

Eustoma grandiflorum cultivar:Pink Thumb

Project description:Transcriptome analysis in Eustoma grandiflorum root

| PRJDB9734 | ENA

EST sequencing and microarray analysis of the floral transcriptome of Eustoma grandiflorum

Project description:Genome-wide DNA sequence resources are expected to enhance our understanding of the molecular basis of plant development and lead to improvements in desirable traits in horticultural crops. In this study, we sequenced 643,366 ESTs from Eustoma grandiflorum flowers using a normalised cDNA library constructed for several different flower development stages, times of day, and pollinated stamens. The sequences were assembled into 63,401 contigs and 242,212 singletons. BlastX searches for all of the contigs in the GenBank database matched 65% of the contigs to registered sequences, while 35% presented no hits. GO mapping assigned 48% of the 63,401 contigs to GO terms. Microarray analysis showed that subsets of genes were up- or downregulated as the flower developed. The downregulated genes were enriched for GO terms related to 1) oligopeptide transport, 2) response to jasmonic acid stimulus, and 3) cell wall modification, whereas the upregulated genes were enriched for GO terms involved in 1) secondary metabolism, such as the flavonoid biosynthetic process and the terpenoid biosynthetic process, and 2) epidermal cell modification.

2012-09-01 | GSE34332 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data