Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Whole genome sequencing of yeast strain F45

ABSTRACT: Whole genome sequencing of S. cerevisiae strain F45, progeny of a cross between YO502, a modified haploid progeny of diploid strain DBVPG1853 (white-tecc strain), and YO486, a modified version of strain UC5 (sake strain).

PROVIDER: PRJEB15176 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

YCR5

Project description:RAD-seq of 552 S. cerevisiae strains from a cross between Sake-brewing strain YO486 (UC5) and white tecc strain YO502 (DBVPG1853)

| PRJEB22560 | ENA

YCR5C Tecc-Sake-1 progeny RADseq

Project description:RADseq of progeny tetrads of strain Tecc-Sake-1

| PRJEB32670 | ENA

Responses to ethanol in haploid and diploid strain

2010-01-30 | GSE20108 | GEO

Project description:RAD-seq of progeny from cross UC5 x DBVPG1853 for ploidy estimation

| PRJEB1767 | ENA

YO502 YSEQ4 WGS

Project description:Whole genome sequencing of white tecc strain YO502 (DBVPG1853)

| PRJEB22489 | ENA

YO486 YSEQ6 WGS

Project description:Whole genome sequencing of Sake brewing strain UC5

| PRJEB68822 | ENA

Responses to ethanol in haploid and diploid strain

Project description:Diploid and haploid strains often exhibit different tolerance to variety of stresses. Transcriptome of acclimation to ethanol stress in diploid and haploid strain of Saccharomyces cerevisiae was analyzed. We analyzed transcriptome profiles of diploid and haploid strains in the presence of ethanol. Haploid and diploid strains were cultured in YEPD media with 0%, 3% and 7% ethanol(v/v) in fermentors. The samples were collected at the growth stage for each strain under different conditions.

2010-02-21 | E-GEOD-20108 | biostudies-arrayexpress

Genome-wide maps of histone H3 variant CENP-A/Cnp1 in the meiotic haploid progeny of wip1∆/+, mhf1∆/+ and mhf2∆/+ and genome-wide maps of histone H3 variant CENP-A/Cnp1 in mhf2+ (or mhf2∆) carrying the inactivated Centromere 1 or Centromere 2.

Project description:We report the high-throughput profiling of histone variant CNEP-A/Cnp1 in fission yeast Schizosaccharomyces pombe. By obtaining 1-10 ng immunoprecipitated DNA, we generated genome-wide CENP-A/Cnp1 maps of the wild type meiotic haploid progeny of heterozygous deletion diploid wip1∆/+, mhf1∆/+ and mhf2∆/+ and CENP-A/Cnp1 maps of mhf2+ carrying the inactivated Centromere 1 or Centromere 2. We find that CENP-A/Cnp1 spreading into the pericentromeric regions in wild type meiotic progeny of heterozygous deletion diploid wip1∆/+, mhf1∆/+ and mhf2∆/+.

2019-09-28 | GSE131223 | GEO

Trivalent arsenic inhibits the functions of chaperonin complex

Project description:The goal of this study was to identify yeast mutants with arsenite hypersensitivity. Keywords: dose response Matched pools of yeast knockout (YKO) mutants were grown in paired growth media lacking or containing arsenite at various concentrations. The relative abundances of the YKO mutants were profiled using microarrays. Three types of pools were used in this study: (1) heterozygous diploid mutants; (2) haploid mutants obtained as progeny from the heterozygous diploid pool; and (3) haploid mutants also containing a null mutation of the prefoldin gene PFD1.

2010-07-26 | E-GEOD-5973 | biostudies-arrayexpress

Transcriptomic analysis of HOK following interaction with diploid and haploid Candida albicans strains

Project description:A comprehensive RNASeq analysis was performed on Primary Human Oral Keratinocytes following their interaction with the haploid WT strain GZY903 and the diploid strain SC5314. Results imply the differential response of host to both strain types.

2020-08-01 | GSE127072 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data