Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Soil fungal assemblages in Nagri, Tibet

ABSTRACT: Soil depth-based community assembly processes in Ngari drylands, Tibet

PROVIDER: PRJEB18012 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

wetland soil fungal community from Qinghai-Tibet plateau

Project description:wetland soil fungal community from Qinghai-Tibet plateau Raw sequence reads

| PRJNA797885 | ENA

The microbial functional diversity in response to altered precipitation on Tibet Plateau as characterized by GeoChip

Project description:Global warming substantially changes precipitation patterns in the Tibetan plateau, with projection of increased precipitation in southern and northern Tibet but decreased precipitation in the center. Understanding mechanisms of such changes in greenhouse gas emissions is of vital importance in predicting ecosystem feedbacks to climate changes. Nonetheless, it has been hampered by limited knowledge in soil microbial communities, one of the major drivers of greenhouse gas emission. Here, we report a field experiment simulating drying and wetting conditions in the Tibetan grassland. Our field site is located at the Haibei Alpine Grassland Ecosystem Research Station in the northeast of Tibet Plateau, China, and we employed GeoChip 5.0 180K to analyze microbial responses.

2016-05-28 | GSE82006 | GEO

Tibet Environment

Project description:Tibet Environment Metagenome

| PRJNA316914 | ENA

The microbial functional diversity in response to altered precipitation on Tibet Plateau as characterized by GeoChip

2016-05-28 | E-GEOD-82006 | biostudies-arrayexpress

Qinghai-Tibet Plateau soil

Project description:Qinghai-Tibet Plateau soil

| PRJNA658924 | ENA

Tibet soil ITS

Project description:Tibet soil ITS Raw sequence reads

| PRJNA835245 | ENA

Tibet soil 16S

Project description:Tibet soil 16S Raw sequence reads

| PRJNA835233 | ENA

Tibet Warming soil

Project description:Tibet Warming soil Raw sequence reads

| PRJNA611879 | ENA

Denitrifying bacterial assemblages respond to environmental conditions of a shallow estuary

Project description:Molecular analysis of dissimilatory nitrite reductase genes (nirS) was conducted using a customized microarray containing 165 nirS probes (archetypes) to identify members of sedimentary denitrifying communities. The goal of this study was to examine denitrifying community responses to changing environmental variables over spatial and temporal scales in the New River Estuary (NRE), NC, USA. Multivariate statistical analyses revealed three denitrifier assemblages and uncovered “generalist” and “specialist” archetypes based on the distribution of archetypes within these assemblages. Generalists, archetypes detected in all samples during at least one season, were commonly world-wide found in estuarine and marine ecosystems, comprised 11-29% of the abundant NRE archetypes. Archetypes found in a particular site, “specialists”, were found to co-vary based on site specific conditions. Archetypes specific to the lower estuary in winter were designated Cluster I and significantly correlated by sediment Chl a and porewater Fe2+. A combination of specialist and more widely distributed archetypes formed Clusters II and III, which separated based on salinity and porewater H2S, respectively. The co-occurrence of archetypes correlated with different environmental conditions highlights the importance of habitat type and niche differentiation among denitrifying communities and supports the essential role of individual community members in overall ecosystem function.

2017-05-02 | GSE98190 | GEO

Tibet hot springs sediments

Project description:Tibet hot springs sediments Raw sequence reads

| PRJNA693970 | ENA