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TRICINCTUM

ABSTRACT: Genome sequence of the “emerging” mycotoxin-producing filamentous fungus Fusarium tricinctum

PROVIDER: PRJEB26420 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	OVTS02.dat.gz	Other
	OVTS02.fasta.gz	Fasta.gz
	OVTS02.master.dat	Other
	OVTS01.dat.gz	Other

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Fusarium tricinctum

Project description:Fusarium tricinctum overview

| PRJNA435454 | ENA

Gene expression during early infection of the susceptible spring wheat cultivar Roblin with Fusarium graminearum strains producing or not DON.

Project description:Fusarium head blight (FHB) is a major disease of cereal crops caused by the fungus Fusarium graminearum (Fg). FHB affects the flowering heads (or spikes). This study compare the gene expression profile in wheat spikelets from the very susceptible spring wheat cultivar Roblin inoculated with either water (H2O), a Fg strain (GZ3639) producing the mycotoxin deoxynivalenol (+DON), or a GZ3639-derived Fg strain which has been inactivated at the Tri5 locus (-DON).

2015-06-03 | GSE54554 | GEO

Fusarium tricinctum strain:KGS30-2

Project description:Fusarium tricinctum strain:KGS30-2 Genome sequencing

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Fusarium tricinctum species complex

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Fusarium tricinctum strain:INRA104

Project description:Fusarium tricinctum strain:INRA104 Genome sequencing and assembly

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Fusarium tricinctum strain:T6

Project description:Fusarium tricinctum strain:T6 Genome sequencing and assembly

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Fusarium tricinctum MPI-SDFR-AT-0068

Project description:Fusarium tricinctum MPI-SDFR-AT-0068 Standard Draft

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Fusarium tricinctum MPI-SDFR-AT-0068

Project description:Fusarium tricinctum MPI-SDFR-AT-0068 Transcriptome - Fus_068_T

| PRJNA500523 | ENA

3D structure of the genome of F. gramiinearum strain PH-1

Project description:Fusarium graminearum is an efficient plant pathogen found in crops worldwide. Major causal agent of Fusarium head blight on wheat in Europe, this filamentous fungus can also produce toxic mycotoxins and a variety of secondary metabolites in developing kernels. These secondary metabolites are produced as the result of a cascade of coordinated regulations of an arsenal of genes dispersed accross the genome. Previous study highlighted the roles of the histone marks H3K27me3 and H3K4me3 in regulating the metabolism of F. graminearum. Here, we applied HiC in combination to transcriptomics to explore the functional components of 3D organization of the four chromosomes in the nucleus. We show that the orchestration of genome regulation is mediated by histone-dependant highly topologically structured chromatin that organizes chromosomes in territories to potentiate coordinated genome regulation.

2024-09-14 | GSE243436 | GEO

Molecular pathogenetic study of Fusarium head blight in highly resistant, resistant and susceptible common wheat (Triticum aestivum L.)

Project description:Fusarium graminearum (F.g) is responsible for Fusarium head blight (FHB), which is a destructive disease of wheat that accumulates mycotoxin such as deoxynivalenol (DON) and makes its quality unsuitable for end use. Several FHB resistant varieties development is going on world-wide. However the complete understanding of wheat defence response, pathogen (Fusarium graminearum) disease development mechanism and the gene crosstalk between organisms is still unclear. In our study focused to analyse pathogen (F. graminearum) molecular action in different Fusarium head blight resistance cultivars during the disease development. To understand the Fusarium graminearum pathogen molecular reaction, microarray gene expression analysis was carried out by using Fusarium graminearum (8 x 15k) Agilent arrays at two time points (3 & 7 days after infection) on three wheat genotypes (Japanese landrace cv. Nobeokabouzu-komugi - highly resistant, Chinese cv. Sumai 3 - resistant and Australian cv. Gamenya - susceptible), which spikes infected by Fusarium graminearum ‘H-3’strain. During the disease development the pathogen biomass as well as the expression of Trichothecene biosynthesis involved genes (Tri genes) in three wheat cultivars was determined. In our material no relation between fungus biomass and the disease symptoms were observed, however, it showed relation with fungus virulence factors expression (Tri genes). For the first time, we report the nature of Fusarium graminearum gene expression in the FHB-highly resistant cv. Nobeokabouzu-komugi during the disease development stage and the possible underlying molecular response.

2015-03-14 | GSE66772 | GEO

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