Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Enrichment and physiological characterization of Ca. N. kreftii

ABSTRACT: Enrichment and physiological characterization of a novel comammox Nitrospira indicates inhibition by ammonium

PROVIDER: PRJEB34681 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Project description:comammox Nitrospira sequencing

| PRJNA738660 | ENA

Growth of complete ammonia oxidizers on guanidine

Project description:The nitrogen rich compound guanidine occurs widely in nature and is used by microbes as a nitrogen source, but microorganisms that grow on guanidine have not yet been discovered. Here we show that complete ammonia-oxidizing microbes (comammox), but no other known nitrifiers, encode homologues of a guanidinase and that the comammox isolate Nitrospira inopinata grows on guanidine as sole source of energy and reductant. Proteomics, kinetic enzyme characterization, and the crystal structure of the N. inopinata guanidinase homologue demonstrated that it is a bona fide guanidinase. Transcription of comammox guanidinases was induced in wastewater treatment plant microbiomes upon incubation with guanidine, and guanidine degradation was detected in these systems. The discovery of guanidine as a selective growth substrate for comammox shows a unique niche of these globally important nitrifiers and offers new options for their isolation as well as for targeted manipulation of nitrifier communities.

2024-08-03 | PXD038826 | Pride

Project description:Enrichment of clade B comammox Nitrospira using lab-scale trickling filters

| PRJNA630389 | ENA

Project description:Comammox Enrichment

| PRJNA548259 | ENA

Genome-wide enrichment of Gcn5 and H3K18/H4K16 acetylation under physiological change of stress adaptation and stress recovery

Project description:The data provide information of Gcn5 enrichment, H3K18 and H4K16 acetylation level and Histone H3 density for 5 different physioloigcal conditions during stress adpatation and stress recovery (normal growth, during stress adaptation, after stress adaptation, under stress recovery, after stress recovery) in yeast. The purpose of the study is to understand how histone acetyltransferase HATs (Gcn5) apply it is function in gene regulation by changing global or local histone acetylation level under different physiological conditions. Gcn5 enrichment, H3K18 and H4K16 acetylation level and Histone H3 density are mearured and compared to input signal for 5 different physioloigcal conditions (normal growth, during stress adaptation, after stress adaptation, under stress recovery, after stress recovery). Replicates are used.

2013-07-22 | E-GEOD-36600 | biostudies-arrayexpress

Project description:study of Comammox Nitrospira in Alfisol soil

| PRJNA688361 | ENA

Genome-wide enrichment of Gcn5 and H3K18/H4K16 acetylation under physiological change of stress adaptation and stress recovery

2013-07-22 | GSE36600 | GEO

Brocadia fulgida enrichment metagenome

Project description:Sequencing, assembly and annotation of an anaerobic ammonium oxidizing (anammox) enrichment culture dominated by candidatus Brocadia fulgida.

| PRJEB4876 | ENA

Project description:Enrichment of comammox with different nitrogen

| PRJNA554773 | ENA

soil metagenome

Project description:Enrichment of Nitrospira from acidic soil

| PRJDB9437 | ENA