Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Fennoscandian wolves

ABSTRACT: Whole-genome analyses provide no evidence for dog introgression in Fennoscandian wolf populations

PROVIDER: PRJEB39198 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR4317900_1.fastq.gz	Fastqsanger.gz
	ERR4317900_2.fastq.gz	Fastqsanger.gz
	ERR4317910_1.fastq.gz	Fastqsanger.gz
	ERR4317910_2.fastq.gz	Fastqsanger.gz
	ERR4317920_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 428

Similar Datasets

Genome-wide array comparative genomic hybridization (aCGH) profiling of copy number variations (CNVs) in various dog breeds in comparison to a reference sample

Project description:This study used the NimbleGen dog whole genome CGH 2.1M tiling array to assay copy number variants in the dog genome in multiple breeds and wolf. 53 samples of genomic DNA were hybridized to a reference sample. The dataset comprises 2 samples from each of 15 dog breeds, 10 samples from each of 2 dog breeds and 3 samples from gray wolf.

2012-08-21 | E-GEOD-40210 | biostudies-arrayexpress

Genome-wide array comparative genomic hybridization (aCGH) profiling of copy number variations (CNVs) in various dog breeds in comparison to a reference sample

Project description:This study used the NimbleGen dog whole genome CGH 2.1M tiling array to assay copy number variants in the dog genome in multiple breeds and wolf.

2012-08-21 | GSE40210 | GEO

Fennoscandian Shield groundwater metagenomic sequencing

Project description:Fennoscandian Shield groundwater Metagenome

| PRJNA807667 | ENA

Canine CNVs associated with canFam2 segmental duplications

Project description:This study centered on using a custom made Nimblegen aCGH chip that targeted all segmental duplications in the canine genome to identify associated CNVs. A total of 19 hybridizations were performed in a panel of diverse dogs and a single wolf. Using computational approaches all segmental duplications were identified in the canFam2 genome of the dog. A custom aCGH chip was then built that densely interrogated these segmental duplications for CNVs in a panel of diverse dog breeds and a single wolf.

2010-05-17 | E-GEOD-13266 | biostudies-arrayexpress

Project description:Adaptive introgression in high elevation dog populations

| PRJNA361023 | ENA

Studies of canine breed development on the island of Sardinia recapitulate genomic features of human population isolates [MEDI]

Project description:The Italian island of Sardinia is well known in studies of human population isolates. It is also home to the Fonni's Dog, a breed of canine whose development was reliant on the functionality of the dog. Using genome-wide variant and sequence analyses, we have characterized the Fonni's Dog relative to 27 other dog breeds from the Mediterranean region. We determine introgression events relevant to Mediterranean breed development and describe how the Fonni's dog presents an intriguing model demonstrating the characteristics of traditional human population isolates and, in particular, exhibiting the unique demographic composition of the people of Sardinia.

2016-06-10 | GSE83154 | GEO

Studies of canine breed development on the island of Sardinia recapitulate genomic features of human population isolates [COO]

2016-06-10 | GSE83151 | GEO

Studies of canine breed development on the island of Sardinia recapitulate genomic features of human population isolates [CANE]

2016-06-10 | GSE83225 | GEO

Dire wolves were the last of an ancient New World canid lineage

Project description:Phylogenetic analysis of the extinct dire wolf was carried out to explore the relationship this species had with other Canids.

2020-11-02 | PXD021930 | Pride

Resequencing captured regions of dogs and wolves

Project description:Capture and resequence of dog and wolf samples using Agilent SureSelect and Illumina

| PRJEB7877 | ENA