Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Ve2021

ABSTRACT: Samples of a study the Venice lagoon from a functional perspective via metagenomics.

PROVIDER: PRJEB41646 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	OGS_Ve_C_Aut.fasta.gz	Fasta.gz
	OGS_Ve_C_Win.fasta.gz	Fasta.gz
	OGS_Ve_C_Spr.fasta.gz	Fasta.gz
	OGS_Ve_C_Sum.fasta.gz	Fasta.gz
	OGS_Ve_M_Aut.fasta.gz	Fasta.gz

Items per page:

1 - 5 of 20

Similar Datasets

Gene expression profiling of native mussels from Venice lagoon area

Project description:We examined gene expression profiling of native mussels that were sampled in early summer 2003 from sites of the Venice lagoon area known to be differently affected by chemical pollution: Sites 1 and 2 close to the industrial district of Marghera and Site 3 close to the Lido lagoon outlet. Site 4, a current mussel farm located offshore, has been chosen as source of reference targets for microarray hybridizations. We have limited the preliminary assessment to the digestive gland. Digestive gland total RNA of each Site was hybridized in competition with the offshore mussels (Site 4 - Reference) and the relative abundance of each gene was measured by directly comparing fluorescent signals for each probe. We carried out two separate hybridizations for each site of the Venice lagoon area.. Keywords = digestive gland Keywords = Venice lagoon Keywords = chemical pollution Keywords = native mussels Keywords = transcriptional profiling Keywords: ordered

2006-10-10 | GSE2184 | GEO

Which role for genomics in environmental risk assessment? A case study in Venice Lagoon.

Project description:DNA microarray analyses of Ruditapes philippinarum sampled in Venice lagoon areas subjected to different anthropogenic impact.

2013-10-01 | GSE50062 | GEO

Analyses of transcriptomic responses to heavy metal exposure in Manila clam collected in Venice lagoon areas characterized by different anthropogenic impact

Project description:A Ruditapes philippinarum microarray platform was developed to assess variations on transcritpomic response to copper exposures in Manila clam colelctted in Venice lagoon areas subjected to different anthropogenic impact

2016-09-22 | GSE69811 | GEO

OGS prova

Project description:trial samples of a study in the Venice Lagoon

| PRJEB37029 | ENA

Which role for genomics in environmental risk assessment? A case study in Venice Lagoon.

Project description:DNA microarray analyses of Ruditapes philippinarum sampled in Venice lagoon areas subjected to different anthropogenic impact. A comparative analysis of gene expression was conducted between Manila clam from lowly-polluted Chioggia and Colmata area and polluted Marghera site.

2013-10-01 | E-GEOD-50062 | biostudies-arrayexpress

Toxicogenomic analyses of Ruditapes philippinarum by DNA microarray: new tools for anthropogenic impact assessment on the Venice Lagoon.

Project description:A manila clam oligo microarray platform (GPL10900) was used to profile gene expression in digestive gland of R. philippinarum sampled in four seasons in 4 different areas of Venice Lagoon. For each tissue, total RNA was extracted from four (4) independent biological replicates of digestive gland, each consisting of tissue pools of five (5) animals.

2013-02-15 | GSE26985 | GEO

Project description:Protist community lagoon of Venice and Gulf of Venice

| PRJNA576330 | ENA

Project description:DNA metabarcoding of Venice Lagoon sediment

| PRJNA750327 | ENA

Project description:Study onf seaweed associated microbial communities in the lagoon of Venice

| PRJNA656714 | ENA

Ruditapes philippinarum

Project description:Which role for genomics in environmental risk assessment? A case study in Venice Lagoon.

| PRJNA215903 | ENA