Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Enterococcus faecalis ATCC 35038

ABSTRACT: Enterococcus faecalis ATCC 35038 Genome sequencing and assembly

PROVIDER: PRJNA157749 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ASDE01.dat.gz	Other
	ASDE01.fasta.gz	Fasta.gz
	ASDE01.master.dat	Other
	SRR633800_1.fastq.gz	Fastqsanger.gz
	SRR633800_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Transcriptomic response of Enterococcus faecalis to iron excess

2012-03-01 | GSE34432 | GEO

Transcriptomic response of Enterococcus faecalis to iron excess

Project description:To further investigate the homeostatic response of E. faecalis to Fe exposure, we examine the whole-genome transcriptional response of wild-type (WT) exposed to non toxic Fe excess. This experiment correspond the work titled Transcriptomic response of Enterococcus faecalis to iron excess (work in preparation) A four chip study using total RNA recovered from four separate wild-type cultures of Enterococcus faecalis OG1RF, two controls samples (N medium growth) and two iron samples (N medium gowth with 0.5 mM Fe-NTA). Each chip measures the expression level of 3,114 genome genes from Enterococcus faecalis strain V583 (A7980-00-01).

2012-03-01 | E-GEOD-34432 | biostudies-arrayexpress

Effect of Gliotoxin on Enterococcus faecalis

Project description:Proteomic analysis of the effects of gliotoxin on Enterococcus faecalis.

2023-05-26 | MSV000092038 | MassIVE

Transcriptome analysis of Enterococcus faecalis OG1 delta-EF2638 mutant

Project description:Analysis of changes in gene expression in Enterococcus faecalis OG1 delta-EF2638 mutant compared to wild-type OG1 strain. The deletion mutant has a growth defect when grown with aeration The mutant presented in this study is described and characterized in Vesic, D. and Kristich, C.J. 2012. A Rex-family transcriptional repressor influnces H2O2 accumulation by Enterococcus faecalis. (submitted for publication) Microarray analysis was done using RNA isolated from two independent cultures of wild-type Enterococcus faecalis OG1 and two independent cultres of Enterococcus faecalis OG1 delta-EF2638 mutant; each RNA sample was subjected to triplicate hybridization (technical replicates) . Microarrays were custom designed to investigate expression of ORFs in Enterococcus faecalis OG1RF genome. The arrays were designed based on the OG1RF annotation generated with the Rapid Annotation Using Subsystem Technology (RAST) server (Aziz et. al. 2008. BMC Genomics 9:75), as described in Frank et al (2012) Infect. Immun. 80:539. The aim was eighteen probe pairs per ORF, each of which is present in triplicate.

2013-04-15 | E-GEOD-43228 | biostudies-arrayexpress

Enterococcus faecalis ATCC 10100

Project description:Enterococcus faecalis ATCC 10100 Genome sequencing and assembly

| PRJNA157795 | ENA

Enterococcus faecalis ATCC 6055

Project description:Enterococcus faecalis ATCC 6055 Genome sequencing and assembly

| PRJNA157793 | ENA

Enterococcus faecalis ATCC 29200

Project description:Enterococcus faecalis ATCC 29200 Genome sequencing and assembly

| PRJNA89055 | ENA

Enterococcus faecalis ATCC 27959

Project description:Enterococcus faecalis ATCC 27959 Genome sequencing and assembly

| PRJNA89081 | ENA

Enterococcus faecalis ATCC 19433

Project description:Enterococcus faecalis ATCC 19433 Genome sequencing and assembly

| PRJNA157741 | ENA

Enterococcus faecalis ATCC 27275

Project description:Enterococcus faecalis ATCC 27275 Genome sequencing and assembly

| PRJNA89079 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data