Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Clupea harengus strain:Baltic

ABSTRACT: Strong signatures of selection in Atlantic herring: A marine fish with huge population sizes

PROVIDER: PRJNA179110 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR611605_1.fastq.gz	Fastqsanger.gz
	SRR611605_2.fastq.gz	Fastqsanger.gz
	SRR611619_1.fastq.gz	Fastqsanger.gz
	SRR611619_2.fastq.gz	Fastqsanger.gz
	SRR611620_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 20

Similar Datasets

Clupea harengus strain:Baltic

Project description:Strong signatures of selection in Atlantic herring: A marine fish with huge population sizes

| PRJNA179109 | ENA

Clupea harengus strain:Atlantic

Project description:Strong signatures of selection in Atlantic herring: A marine fish with huge population sizes

| PRJNA179107 | ENA

Clupea harengus

Project description:Atlantic herring small RNA sequencing

| PRJNA473650 | ENA

Clupea harengus

Project description:Comparison of herring populations across the North Atlantic Ocean

| PRJNA338612 | ENA

Clupea harengus HiC genome

Project description:Chromosome-level assembly of Atlantic herring (Clupea harengus)

| PRJEB31270 | ENA

Clupea harengus

Project description:Identification and characterization of coding and noncoding TSHR polymorphisms affecting photoperiodic regulation of reproduction in Atlantic herring

| PRJNA660525 | ENA

Thermal conditions and age structure determine the spawning regularities and condition of Baltic herring (<i>Clupea harengus membras</i>) in the NE of the Baltic Sea.

Project description:Baltic herring (Clupea harengus membras) is a total spawner with a group-synchronous ovarian organization. Age polymodality in total spawners is considered an important factor in assuring that a strong population is sustainable under an intensive harvesting regime and different climatic conditions. In the present study, we investigated the seasonal and inter-annual variation in spawner age structure and the effect of preceding winter thermal conditions on the start of the herring spawning and larvae retention period. Herring spawning season in the Gulf of Riga starts up to six weeks later after colder winters compared to milder winters. Significantly older individuals dominated at the beginning of the spawning season, and thus herring mean age gradually decreased towards the end of the spawning season from 1999-2015. On an annual scale, this pattern was obvious after cold winters, while after mild winters the pattern did not continue, indicating a more homogenous maturation cycle and spawning period, despite the age and size of the herring population in mild winters. Further, herring condition factor was studied in relation to age and spawning season following different winter thermal conditions. Young, 2- and 3- year old first-spawning herring experienced significantly lower conditions after cold winters compared to older ages, indicating an age-dependent effect of preceding winter on herring maturation cycle, condition and spawning time.

| S-EPMC6657675 | biostudies-literature

The Effect of Camelina Oil-Containing Diets on the Expression of Genes Involved in the Innate Anti-Viral Immune Response in Atlantic Cod (Gadus Morhua)

Project description:This study was performed to investigate the effect of camelina oil-based diets on the immune function of Atlantic cod, as measured by gene expression in spleen. Atlantic cod were fed with one of three practical diets (three tanks per diet): a control diet using herring oil as a lipid source (FO diet), and two experimental diets using vegetable oil from Camelina sativa to replace 40% or 80% of herring oil (40CO and 80CO diets). We studied both the effect of the diet alone on basal spleen gene expression levels, as well as the effect of the diet after fish were injected with the synthetic double-stranded RNA polyriboinosinic polyribocytidylic acid (pIC), which mimics a viral immune stimulus.

2014-12-31 | GSE54358 | GEO

Ecological adaptation of Atlantic Herring (Clupea harengus) in the Baltic Sea

Project description:Adaptation of Atlantic Herring to the Baltic Sea from marine origins was a relatively recent and rapid process that has driven genetic differentiation between the populations. One of the strongest loci is analyzed with this data.

| PRJEB32358 | ENA

Clupea harengus

Project description:Clupea harengus Genome sequencing and assembly

| PRJNA265919 | ENA