Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Nicotiana sylvestris strain:TW136

ABSTRACT: Nicotiana sylvestris strain:TW136 Genome sequencing and assembly

PROVIDER: PRJNA182500 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ASAF01.dat.gz	Other
	ASAF01.fasta.gz	Fasta.gz
	ASAF01.master.dat	Other
	ASAF01.dat.gz	Other

Items per page:

1 - 4 of 4

Similar Datasets

Nicotiana sylvestris

Project description:Nicotiana sylvestris Organism overview

| PRJNA108705 | ENA

Nicotiana sylvestris

Project description:Nicotiana sylvestris Transcriptome or Gene expression

| PRJNA107941 | ENA

Nicotiana sylvestris

Project description:WGS sequencing, assembly and annotation of the diploid tobacco Nicotiana sylvestris

| PRJNA170653 | ENA

Nicotiana attenuata strain:UT

Project description:Nicotiana attenuata strain:UT Genome sequencing and assembly

| PRJNA316810 | ENA

Heat-stress of maturing microspores derived from wild type and starch-less mutant plants of Nicotiana sylvestris

Project description:Pollen development is one of the most heat-sensitive developmental stages in a wide range of crops. Our longer-term goal is to understand the mechanism how starch metabolism in maturing pollen grains of the Solanaceae family contributes to maintaining higher pollen quality under heat-stress conditions. The specific aim of the suggested proposal is to characterize N. sylvestris WT and mutant (starch-deficient) transcriptomes during microgametogenesis under ambient and heat-stress conditions. Expression profiles of maturing microspores derived from flower buds at developmental stage of 4 to 2 days before flower opening will be obtained. Pollen was derived from WT and mutant plants exposed to either ambient or heat-stress conditions (exposing the plants to 45oC for 2.5 hours). Keywords: Loop design

2008-02-13 | GSE10489 | GEO

Nicotiana tabacum strain:SR1

Project description:Nicotiana tabacum strain:SR1 Genome sequencing

| PRJNA72933 | ENA

Pinus sylvestris

Project description:Pinus sylvestris targeted sequencing

| PRJNA592869 | ENA

Olea europaea var. sylvestris

Project description:Olea europaea var. sylvestris Genome sequencing and assembly

| PRJNA350614 | ENA

Vitis vinifera subsp. sylvestris

Project description:Vitis vinifera subsp. sylvestris Genome sequencing and assembly

| PRJNA625615 | ENA

Malva sylvestris anti-inflammatory activity in oral human cells

Project description:Real-time quantitative PCR analysis of human epithelial cells The activity of Malva sylvestris extract and fractions infected by A. actinomycetemcomitans were investigated using an adapted dual chamber model, oral human epithelial cells were used in the co-culture model. One microgram of RNA was converted in cDNA using RT2 First Strand Kit. 84 genes were analyzed using inflammatory response & Autoimmunity Array RT2 profiler (Qiagen Sabiosciences, Valencia, CA, USA) with buffers supplied by the manufacturer qPCR gene expression profiling. Oral human epithelial cells were infected by A. Actinomycetemcomintans and treated with Malva sylvestris extract and fractions prior to gene expression analysis.

2015-08-27 | E-GEOD-72443 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data