Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Melilotus messanensis

ABSTRACT: Melilotus messanensis overview

PROVIDER: PRJNA185836 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR8704450.fastq.gz	Fastqsanger.gz
	SRR8704451.fastq.gz	Fastqsanger.gz
	SRR8704452.fastq.gz	Fastqsanger.gz
	SRR8704443.fastq.gz	Fastqsanger.gz
	SRR8704453.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Melilotus albus

Project description:Melilotus albus overview

| PRJNA185741 | ENA

Melilotus albus

Project description:Melilotus albus raw sequence reads

| PRJNA330766 | ENA

Melilotus albus

Project description:Melilotus albus NILs with different coumarin content Raw sequence reads

| PRJNA356361 | ENA

Melilotus albus

Project description:Melilotus albus genotypes with different coumarin content Raw sequence reads

| PRJNA331091 | ENA

Medicago sativa and Melilotus officinalis

Project description:Medicago sativa cv. Algonquin and Melilotus officinalis root nodule transcriptome assemblies

| PRJNA751393 | ENA

Melilotus albus

Project description:Identifying similar transcripts in a related organism from de Bruijn graphs of RNA-Seq data, with applications to the study of salt and waterlogging tolerance in Melilotus

| PRJNA185437 | ENA

Melilotus messanensis

Project description:Identifying similar transcripts in a related organism from de Bruijn graphs of RNA-Seq data, with applications to the study of salt and waterlogging tolerance in Melilotus

| PRJNA185444 | ENA

Project description:Melilotus microbiome

| PRJNA603423 | ENA

Project description:Melilotus albus genome sequencing

| PRJNA674670 | ENA

Coumarin Content, Morphological Variation, and Molecular Phylogenetics of Melilotus.

Project description:Melilotus albus and Melilotus officinalis are widely used in forage production and herbal medicine due to the biological activity of their coumarins, which have many biological and pharmacological activities, including anti-HIV and anti-tumor effects. To comprehensively evaluate M. albus and M. officinalis coumarin content (Cou), morphological variation, and molecular phylogeny, we examined the Cou, five morphological traits and the molecular characterization based on the trnL-F spacer and internal transcribed spacer (ITS) regions of 93 accessions. Significant (p < 0.05) variation was observed in the Cou and all five morphological traits in both species. Analysis of population differentiation (Pst) of the phenotypic traits showed that powdery mildew resistance (PMR) had the greatest Pst, meaning that this trait demonstrated the largest genetic differentiation among the accessions. The Pst values of dry matter yield (DMY) and Cou were relatively high. Biplot analysis identified accessions with higher DMY and higher and lower Cou. Analysis of molecular sequence variation identified seven haplotypes of the trnL-F spacer and 13 haplotypes of the ITS region. Based on haplotype and sequence analyses, the genetic variation of M. officinalis was higher than that of M. albus. Additionally, ITS sequence analysis showed that the variation among accessions was larger than that among species across three geographical areas: Asia, Europe, and North America. Similarly, variation among accessions for both the trnL-F and ITS sequences were larger than the differences between the geographical areas. Our results indicate that there has been considerable gene flow between the two Melilotus species. Our characterization of Cou and the morphological and genetic variations of these two Melilotus species may provide useful insights into germplasm improvement to enhance DMY and Cou.

| S-EPMC6017091 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data